Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA97_RS04135 Genome accession   NZ_CP094811
Coordinates   873619..874341 (-) Length   240 a.a.
NCBI ID   WP_085622894.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain IVB6187     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 868619..879341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA97_RS04115 (MUA97_04105) - 869556..870191 (+) 636 WP_037567012.1 redox-sensing transcriptional repressor Rex -
  MUA97_RS04120 (MUA97_04110) - 870374..871459 (+) 1086 WP_262608788.1 YeeE/YedE family protein -
  MUA97_RS04125 (MUA97_04115) - 871482..871709 (+) 228 WP_060551494.1 sulfurtransferase TusA family protein -
  MUA97_RS04130 (MUA97_04120) - 872062..873552 (+) 1491 WP_107369009.1 sucrose-6-phosphate hydrolase -
  MUA97_RS04135 (MUA97_04125) agrA 873619..874341 (-) 723 WP_085622894.1 quorum-sensing response regulator AgrA Regulator
  MUA97_RS04140 (MUA97_04130) agrC 874355..875653 (-) 1299 WP_060551491.1 quorum-sensing sensor histidine kinase AgrC -
  MUA97_RS04145 (MUA97_04135) agrD 875683..875817 (-) 135 WP_060551490.1 cyclic lactone autoinducer peptide AgrD -
  MUA97_RS04150 (MUA97_04140) - 875820..876383 (-) 564 WP_060551489.1 accessory gene regulator AgrB -
  MUA97_RS04155 (MUA97_04145) - 877030..877827 (-) 798 WP_060551488.1 carbon-nitrogen family hydrolase -
  MUA97_RS04160 - 877998..879107 (+) 1110 WP_262608789.1 hypothetical protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 28212.36 Da        Isoelectric Point: 5.4121

>NTDB_id=673036 MUA97_RS04135 WP_085622894.1 873619..874341(-) (agrA) [Staphylococcus agnetis strain IVB6187]
MKILICEDDPKQRERMESIIQNYIMIEEKPMEIEISTSDPYALLEASKNMTDIGCYFLDIQLESDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKLAAMDFIFKDDIDELRTRIIDCLETALKRLDLLTKDNTVETMELKQGSNSVYVNYDDVM
FFESSPKSHRLIAHLDNRQIEFYGNLRELAQIDGRFFRCHNSFVLNRHNITHVDAKERIVYFKNDEFCYVSVRNIKKIKK

Nucleotide


Download         Length: 723 bp        

>NTDB_id=673036 MUA97_RS04135 WP_085622894.1 873619..874341(-) (agrA) [Staphylococcus agnetis strain IVB6187]
TTGAAAATTTTAATTTGTGAGGATGACCCTAAACAAAGAGAACGAATGGAATCCATCATTCAGAATTACATTATGATTGA
AGAAAAGCCTATGGAAATTGAAATTTCTACTAGTGACCCCTATGCGTTACTTGAGGCATCCAAAAATATGACTGATATTG
GTTGTTATTTTTTAGACATCCAATTGGAATCAGATATTAATGGTATTAAGCTTGGTAGCGAAATTCGAAAACATGATCCT
GTAGGTAATATTATTTTTGTAACCAGTCATAGTGAATTAACCTATTTAACTTTCGTGTATAAACTTGCAGCAATGGATTT
TATTTTTAAAGATGACATTGATGAGTTACGTACGAGAATTATTGATTGTCTCGAAACAGCACTTAAGCGGTTAGATTTAT
TAACAAAAGATAACACAGTAGAAACAATGGAATTAAAACAAGGCAGTAATTCTGTCTATGTTAACTATGATGATGTTATG
TTTTTTGAATCTTCACCTAAATCACATCGTTTGATTGCACATTTAGATAATCGGCAAATTGAATTTTATGGTAATTTAAG
AGAGCTCGCACAAATTGATGGTCGTTTTTTTAGATGTCATAATAGTTTTGTGTTAAATCGACATAACATTACGCATGTTG
ATGCTAAAGAGCGCATTGTTTATTTTAAAAATGATGAATTTTGCTATGTGTCTGTAAGAAATATAAAAAAAATCAAGAAA
TAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-240)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

81.933

99.167

0.813