Detailed information NTG0672994

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MUA11_RS10760
• Genome accession: NZ_CP094808
• Coordinates: 2210282..2211652 (-)
• Length: 456 a.a.
• NCBI ID: WP_262625312.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6212
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2205282..2216652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA11_RS10735 (MUA11_10725)	cysE	2205537..2206163 (-)	627	WP_168429109.1	serine O-acetyltransferase	-
MUA11_RS10740 (MUA11_10730)	gltX	2206493..2207947 (-)	1455	WP_262625311.1	glutamate--tRNA ligase	-
MUA11_RS10745 (MUA11_10735)	ispF	2208038..2208514 (-)	477	WP_107390606.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
MUA11_RS10750 (MUA11_10740)	ispD	2208507..2209202 (-)	696	WP_107390607.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
MUA11_RS10755 (MUA11_10745)	-	2209205..2210266 (-)	1062	WP_105994879.1	PIN/TRAM domain-containing protein	-
MUA11_RS10760 (MUA11_10750)	radA	2210282..2211652 (-)	1371	WP_262625312.1	DNA repair protein RadA	Machinery gene
MUA11_RS10765 (MUA11_10755)	-	2211854..2214316 (-)	2463	WP_105994877.1	ATP-dependent Clp protease ATP-binding subunit	-
MUA11_RS10770 (MUA11_10760)	-	2214329..2215333 (-)	1005	WP_037566297.1	protein arginine kinase	-
MUA11_RS10775 (MUA11_10765)	-	2215326..2215844 (-)	519	WP_394371718.1	UvrB/UvrC motif-containing protein	-
MUA11_RS10780 (MUA11_10770)	-	2215856..2216317 (-)	462	WP_037566295.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50114.79 Da
• Isoelectric Point: 7.9601

>NTDB_id=672994 MUA11_RS10760 WP_262625312.1 2210282..2211652(-) (radA) [Staphylococcus agnetis strain IVB6212]
MAKKKITFECTACGYQSPKWMGKCPNCGAWNSMEESLEQKTAHPKHGVRAQKTHAKVQTLNEIKNEQTPRILTKSDEFNR
VLGGGIVQGSLVLIGGDPGIGKSTLLLQMCAALSKTKKVLYITGEESLNQTKLRADRLDEDASALNVFAETDLEVIHDAV
KKVEPELIVVDSIQTIYHPEISSAPGSVSQVRESTQSLMHIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGD
AHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKSVPNPSEMFLEERSTNVPGSMIVATMEGTRPLLIEVQALVTPTTFNNP
RRMATGIDHNRLCLLMAVLEKKEGYLLQQQDAYIKVAGGVKLSEPAVDLGIIIATASSFKDQAVDGLDCFIGEVGLTGEV
RRVSRIEQRVQEAAKLGFKRVIIPKTNIGGWTFPENIEVIGVSSTNEALKHALKQR

Nucleotide

• Length: 1371 bp

>NTDB_id=672994 MUA11_RS10760 WP_262625312.1 2210282..2211652(-) (radA) [Staphylococcus agnetis strain IVB6212]
GTGGCCAAAAAAAAGATTACATTTGAGTGTACTGCATGCGGATACCAGTCTCCAAAATGGATGGGGAAATGCCCAAATTG
CGGTGCATGGAATTCAATGGAAGAATCATTGGAACAAAAAACAGCTCACCCTAAACATGGCGTGCGTGCGCAAAAAACAC
ATGCAAAAGTGCAAACATTAAATGAAATTAAAAATGAACAGACACCACGTATTCTTACTAAAAGTGATGAATTTAACCGT
GTGCTTGGAGGCGGAATTGTTCAAGGTTCTCTCGTACTCATCGGGGGCGATCCAGGTATCGGTAAATCAACACTCCTCCT
TCAAATGTGTGCTGCGTTATCTAAAACTAAGAAAGTACTTTATATTACCGGTGAAGAATCGCTAAATCAAACGAAGCTAC
GCGCCGACCGTTTAGATGAAGATGCTAGTGCACTCAATGTGTTTGCAGAAACGGATCTTGAAGTCATTCATGATGCAGTA
AAAAAAGTGGAACCTGAGTTAATCGTTGTAGATTCCATTCAAACCATTTATCACCCAGAAATCAGTTCTGCACCGGGGTC
AGTATCTCAAGTGAGAGAGAGTACACAAAGCCTCATGCATATTGCCAAACAAATGAATATCGCTACATTTATCGTTGGAC
ACGTTACGAAAGAAGGGCAAATTGCGGGTCCTCGATTGTTAGAACATATGGTGGATACTGTGCTCTATTTTGAAGGCGAT
GCACATCATGCATATCGCATTTTGCGTGCGGTGAAGAACCGGTTTGGTTCTACAAATGAAATGGGAATATTTGAAATGAA
ACAATCGGGTTTAAAAAGTGTGCCGAATCCGTCTGAAATGTTTTTAGAAGAACGCTCTACAAATGTACCAGGTTCTATGA
TTGTGGCAACAATGGAAGGAACCCGTCCGTTACTGATTGAAGTGCAAGCTTTAGTCACACCAACAACTTTTAACAATCCT
AGACGAATGGCTACAGGTATCGATCATAATCGCCTATGTTTGTTAATGGCTGTTTTAGAGAAAAAAGAAGGGTATTTACT
CCAACAACAAGATGCATATATTAAAGTAGCAGGTGGTGTCAAATTAAGTGAACCTGCTGTTGATTTAGGTATCATCATTG
CGACAGCTTCAAGTTTTAAAGATCAAGCTGTTGATGGATTAGATTGTTTTATAGGTGAAGTAGGTTTAACCGGGGAAGTG
CGCAGAGTCTCCCGTATTGAACAAAGGGTTCAAGAAGCGGCGAAGTTGGGATTCAAACGCGTCATTATTCCGAAAACCAA
TATCGGTGGGTGGACATTCCCAGAAAATATAGAAGTAATCGGTGTGTCTTCAACAAATGAAGCATTAAAGCATGCCTTAA
AACAAAGATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (63-219)

• Subunit ChlI of Mg-chelatase (ChlI) (344-427)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	66.087	100	0.667
radA	Streptococcus pneumoniae Rx1	59.031	99.561	0.588
radA	Streptococcus pneumoniae D39	59.031	99.561	0.588
radA	Streptococcus pneumoniae R6	59.031	99.561	0.588
radA	Streptococcus pneumoniae TIGR4	59.031	99.561	0.588
radA	Streptococcus mitis NCTC 12261	59.031	99.561	0.588
radA	Streptococcus mitis SK321	59.031	99.561	0.588