Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA11_RS04125 Genome accession   NZ_CP094808
Coordinates   891335..892057 (-) Length   240 a.a.
NCBI ID   WP_037567007.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain IVB6212     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 886335..897057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA11_RS04105 (MUA11_04100) - 887273..887908 (+) 636 WP_037567012.1 redox-sensing transcriptional repressor Rex -
  MUA11_RS04110 (MUA11_04105) - 888091..889176 (+) 1086 WP_262625890.1 YeeE/YedE family protein -
  MUA11_RS04115 (MUA11_04110) - 889199..889423 (+) 225 WP_105995601.1 sulfurtransferase TusA family protein -
  MUA11_RS04120 (MUA11_04115) - 889778..891268 (+) 1491 WP_262625891.1 sucrose-6-phosphate hydrolase -
  MUA11_RS04125 (MUA11_04120) agrA 891335..892057 (-) 723 WP_037567007.1 quorum-sensing response regulator AgrA Regulator
  MUA11_RS04130 (MUA11_04125) agrC 892071..893369 (-) 1299 WP_394371728.1 quorum-sensing sensor histidine kinase AgrC -
  MUA11_RS04135 (MUA11_04130) agrD 893392..893526 (-) 135 WP_105995605.1 cyclic lactone autoinducer peptide AgrD -
  MUA11_RS04140 (MUA11_04135) - 893529..894092 (-) 564 WP_262625893.1 accessory gene regulator AgrB -
  MUA11_RS04145 (MUA11_04140) - 894740..895537 (-) 798 WP_262619167.1 carbon-nitrogen family hydrolase -
  MUA11_RS04150 (MUA11_04145) - 895708..896829 (+) 1122 WP_262625895.1 SdrH family protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 28242.39 Da        Isoelectric Point: 5.4121

>NTDB_id=672973 MUA11_RS04125 WP_037567007.1 891335..892057(-) (agrA) [Staphylococcus agnetis strain IVB6212]
MKILICEDDPKQRERMESIIQNYIMIEEKPMEIEISTSDPYALLEASKNMTDIGCYFLDIQLESDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKLAAMDFIFKDDIDELRTRIIDCLETALKRLDLLTKDNTVETMELKQGSNSVYVNYDDVM
FFESSPKSHRLIAHLDNRQIEFYGNLRELAQIDSRFFRCHNSFVLNRHNITHVDAKERIVYFKNDEFCYVSVRNIKKIKK

Nucleotide


Download         Length: 723 bp        

>NTDB_id=672973 MUA11_RS04125 WP_037567007.1 891335..892057(-) (agrA) [Staphylococcus agnetis strain IVB6212]
TTGAAAATTTTAATTTGTGAGGATGACCCTAAACAAAGAGAACGAATGGAATCCATCATTCAGAATTACATTATGATTGA
AGAAAAGCCTATGGAAATTGAAATTTCTACTAGTGATCCCTATGCGTTGCTTGAGGCATCCAAAAATATGACTGATATTG
GTTGTTATTTTTTAGACATCCAATTGGAATCAGATATTAATGGTATTAAGCTTGGTAGCGAAATTCGAAAACATGATCCT
GTAGGTAATATTATTTTTGTAACCAGTCATAGTGAATTAACCTATTTAACTTTCGTGTATAAACTTGCAGCAATGGATTT
TATTTTTAAAGATGACATTGATGAGTTACGTACGAGAATTATTGATTGTCTCGAAACAGCACTTAAGCGGTTAGATTTAT
TAACAAAAGATAACACAGTAGAAACAATGGAATTAAAACAAGGCAGTAATTCTGTCTATGTTAACTATGATGATGTTATG
TTTTTTGAATCTTCACCTAAGTCACATCGTTTGATTGCACATTTAGATAATCGGCAAATTGAATTTTATGGTAATCTAAG
AGAGCTCGCACAAATTGATAGTCGTTTTTTTAGATGTCATAATAGTTTTGTGTTAAATCGACATAACATTACGCATGTTG
ATGCTAAAGAGCGCATTGTTTATTTTAAAAATGATGAATTTTGCTATGTGTCTGTTAGAAATATAAAAAAAATCAAGAAA
TAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-240)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

81.933

99.167

0.813