Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OH736_RS23615 | Genome accession | NZ_CP109258 |
| Coordinates | 5236533..5239061 (+) | Length | 842 a.a. |
| NCBI ID | WP_259934123.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_01650 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5231533..5244061
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OH736_RS23580 (OH736_23535) | - | 5232102..5232899 (+) | 798 | WP_259934127.1 | type III pantothenate kinase | - |
| OH736_RS23585 (OH736_23540) | - | 5233038..5233622 (+) | 585 | WP_406163454.1 | hypothetical protein | - |
| OH736_RS23590 (OH736_23545) | - | 5233671..5233850 (+) | 180 | WP_124719475.1 | hypothetical protein | - |
| OH736_RS23595 (OH736_23550) | - | 5233959..5234447 (+) | 489 | WP_329591323.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| OH736_RS23600 (OH736_23555) | - | 5234457..5235014 (+) | 558 | WP_329591325.1 | amino-acid N-acetyltransferase | - |
| OH736_RS23605 (OH736_23560) | - | 5235185..5235520 (+) | 336 | WP_124719472.1 | Lsr2 family protein | - |
| OH736_RS23610 (OH736_23565) | - | 5235499..5236104 (-) | 606 | WP_329591327.1 | SCO3374 family protein | - |
| OH736_RS23615 (OH736_23570) | clpC | 5236533..5239061 (+) | 2529 | WP_259934123.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OH736_RS23620 (OH736_23575) | - | 5239157..5242369 (-) | 3213 | WP_406160093.1 | NACHT domain-containing protein | - |
| OH736_RS23625 (OH736_23580) | - | 5242366..5242728 (-) | 363 | WP_266690176.1 | trypco2 family protein | - |
| OH736_RS23630 (OH736_23585) | - | 5243179..5243889 (+) | 711 | WP_406160095.1 | M23 family metallopeptidase | - |
Sequence
Protein
Download Length: 842 a.a. Molecular weight: 93115.39 Da Isoelectric Point: 5.9175
>NTDB_id=672880 OH736_RS23615 WP_259934123.1 5236533..5239061(+) (clpC) [Streptomyces sp. NBC_01650]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGSKEAATAGGPAEG
TPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK
DKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLI
DEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDGEL
IAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS
KTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILE
DGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQL
SQEDIIQIVDLMIAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFGELRPGHIVVV
GTEGEGEEKAFTFRGEEKSALPDVPPIEQAAGGAGPNMSKDV
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGSKEAATAGGPAEG
TPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK
DKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLI
DEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDGEL
IAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS
KTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILE
DGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQL
SQEDIIQIVDLMIAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFGELRPGHIVVV
GTEGEGEEKAFTFRGEEKSALPDVPPIEQAAGGAGPNMSKDV
Nucleotide
Download Length: 2529 bp
>NTDB_id=672880 OH736_RS23615 WP_259934123.1 5236533..5239061(+) (clpC) [Streptomyces sp. NBC_01650]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTTATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACGCCCCGGGCCAAGAAGGTCCTGGAGCTCTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTCGGCGCCGACCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGGTACTCGGGCAGCAAGGAGGCGGCGACCGCGGGCGGCCCCGCGGAAGGC
ACGCCCTCCACGTCCCTGGTGCTCGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGCGAATCCAAGCTCGACCCGGT
CATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTTCTCATCGGCG
AGCCCGGCGTCGGCAAGACGGCGGTCGTCGAAGGACTGGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAG
GACAAGCACCTCTACACCCTCGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA
GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTCGTGGGTGCGGGTG
CCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGTGCCACC
ACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCC
GTCGCTGCCGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCCCACCACCGCGTCTCCATCACGGACG
AGGCGCTGGTCCAGGCCGCGACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGG
CGTCCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCGTCCCTGCGCGACAAGGAGAAGCAGC
TTCTCGCCGCGAAGACCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTGGCCGAGGTCGACGGCGAGCTG
ATCGCCGAGGTCCTGGCCACCGCCACCGGCATCCCGGTCTTCAAGCTGACGGAGGAGGAGTCCTCCCGTCTGCTGCGCAT
GGAGGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCCCTCTCGCAGGCGATCCGCCGTACGCGGG
CCGGCCTGAAGGACCCGAAGCGCCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACGGAGCTCTCC
AAGACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATTTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACAC
GGTTTCCCGCCTCTTCGGTTCTCCCCCCGGTTACGTGGGTTACGAAGAGGGTGGCCAGCTCACCGAGAAGGTGCGCCGCA
AGCCGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCCGATATCTTCAATTCCCTGCTCCAGATTCTGGAA
GACGGTCGTCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGGAC
GCGGGACATCTCGAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTCAAGACCGGCTACGAGCGGATGAAGAACA
AGGTCAACGAGGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTC
AGCCAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGTCTGAAGGACCGCGACATGGGCAT
CGAGCTCAGCGGTGAAGCCAAGACGCTGCTCGCCAAGAAGGGCTACGACCCCGTGATGGGCGCCCGGCCGCTGCGCCGGA
CGATCCAGCGCGAGATCGAGGACATCCTCTCCGAGAAGATCCTCTTCGGTGAGCTGCGCCCCGGTCACATCGTGGTCGTC
GGCACCGAGGGCGAGGGTGAGGAGAAGGCGTTCACCTTCCGCGGCGAGGAGAAGTCGGCACTGCCCGACGTCCCGCCGAT
CGAGCAGGCGGCAGGCGGCGCGGGCCCGAACATGTCGAAGGACGTGTGA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTTATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACGCCCCGGGCCAAGAAGGTCCTGGAGCTCTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTCGGCGCCGACCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGGTACTCGGGCAGCAAGGAGGCGGCGACCGCGGGCGGCCCCGCGGAAGGC
ACGCCCTCCACGTCCCTGGTGCTCGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGCGAATCCAAGCTCGACCCGGT
CATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTTCTCATCGGCG
AGCCCGGCGTCGGCAAGACGGCGGTCGTCGAAGGACTGGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAG
GACAAGCACCTCTACACCCTCGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA
GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTCGTGGGTGCGGGTG
CCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGTGCCACC
ACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCC
GTCGCTGCCGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCCCACCACCGCGTCTCCATCACGGACG
AGGCGCTGGTCCAGGCCGCGACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGG
CGTCCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCGTCCCTGCGCGACAAGGAGAAGCAGC
TTCTCGCCGCGAAGACCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTGGCCGAGGTCGACGGCGAGCTG
ATCGCCGAGGTCCTGGCCACCGCCACCGGCATCCCGGTCTTCAAGCTGACGGAGGAGGAGTCCTCCCGTCTGCTGCGCAT
GGAGGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCCCTCTCGCAGGCGATCCGCCGTACGCGGG
CCGGCCTGAAGGACCCGAAGCGCCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACGGAGCTCTCC
AAGACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATTTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACAC
GGTTTCCCGCCTCTTCGGTTCTCCCCCCGGTTACGTGGGTTACGAAGAGGGTGGCCAGCTCACCGAGAAGGTGCGCCGCA
AGCCGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCCGATATCTTCAATTCCCTGCTCCAGATTCTGGAA
GACGGTCGTCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGGAC
GCGGGACATCTCGAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTCAAGACCGGCTACGAGCGGATGAAGAACA
AGGTCAACGAGGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTC
AGCCAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGTCTGAAGGACCGCGACATGGGCAT
CGAGCTCAGCGGTGAAGCCAAGACGCTGCTCGCCAAGAAGGGCTACGACCCCGTGATGGGCGCCCGGCCGCTGCGCCGGA
CGATCCAGCGCGAGATCGAGGACATCCTCTCCGAGAAGATCCTCTTCGGTGAGCTGCGCCCCGGTCACATCGTGGTCGTC
GGCACCGAGGGCGAGGGTGAGGAGAAGGCGTTCACCTTCCGCGGCGAGGAGAAGTCGGCACTGCCCGACGTCCCGCCGAT
CGAGCAGGCGGCAGGCGGCGCGGGCCCGAACATGTCGAAGGACGTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.71 |
95.843 |
0.591 |
| clpC | Streptococcus mutans UA159 |
44.819 |
98.575 |
0.442 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.146 |
97.387 |
0.43 |
| clpC | Streptococcus thermophilus LMD-9 |
43.426 |
98.456 |
0.428 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.373 |
98.575 |
0.428 |
| clpC | Streptococcus pneumoniae Rx1 |
44.154 |
95.487 |
0.422 |
| clpC | Streptococcus pneumoniae D39 |
44.154 |
95.487 |
0.422 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.905 |
95.487 |
0.419 |
| clpE | Streptococcus mutans UA159 |
53.994 |
74.347 |
0.401 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.044 |
75.534 |
0.393 |
| clpE | Streptococcus pneumoniae R6 |
51.887 |
75.534 |
0.392 |
| clpE | Streptococcus pneumoniae Rx1 |
51.887 |
75.534 |
0.392 |
| clpE | Streptococcus pneumoniae D39 |
51.887 |
75.534 |
0.392 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.419 |
73.634 |
0.386 |