Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGA   Type   Machinery gene
Locus tag   MUA75_RS07705 Genome accession   NZ_CP094795
Coordinates   1598599..1599573 (-) Length   324 a.a.
NCBI ID   WP_160175981.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6164     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1593599..1604573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA75_RS07665 (MUA75_07655) gcvT 1594100..1595191 (-) 1092 WP_000093354.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA75_RS07670 (MUA75_07660) - 1595350..1595874 (-) 525 WP_001015120.1 shikimate kinase -
  MUA75_RS07675 (MUA75_07665) - 1595864..1596010 (-) 147 WP_001789879.1 hypothetical protein -
  MUA75_RS07680 (MUA75_07670) comGF 1596107..1596604 (-) 498 WP_001825340.1 competence type IV pilus minor pilin ComGF Machinery gene
  MUA75_RS07685 (MUA75_07675) comGE 1596522..1596821 (-) 300 WP_000844413.1 hypothetical protein Machinery gene
  MUA75_RS07690 (MUA75_07680) comGD 1596808..1597254 (-) 447 WP_072357807.1 competence type IV pilus minor pilin ComGD Machinery gene
  MUA75_RS07695 (MUA75_07685) comGC 1597232..1597543 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA75_RS07700 (MUA75_07690) comGB 1597557..1598627 (-) 1071 Protein_1514 competence type IV pilus assembly protein ComGB -
  MUA75_RS07705 (MUA75_07695) comGA 1598599..1599573 (-) 975 WP_160175981.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA75_RS07710 (MUA75_07700) - 1599625..1600248 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  MUA75_RS07715 (MUA75_07705) - 1600245..1600574 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  MUA75_RS07720 (MUA75_07710) - 1600574..1601560 (-) 987 WP_000161315.1 ROK family glucokinase -
  MUA75_RS07725 (MUA75_07715) - 1601557..1601760 (-) 204 WP_000087561.1 YqgQ family protein -
  MUA75_RS07730 (MUA75_07720) - 1601741..1603204 (-) 1464 WP_044122531.1 rhomboid family protein -
  MUA75_RS07735 (MUA75_07725) - 1603216..1603755 (-) 540 WP_000164552.1 5-formyltetrahydrofolate cyclo-ligase -
  MUA75_RS07740 (MUA75_07730) rpmG 1603964..1604113 (-) 150 WP_001265709.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 36926.01 Da        Isoelectric Point: 8.8516

>NTDB_id=672720 MUA75_RS07705 WP_160175981.1 1598599..1599573(-) (comGA) [Staphylococcus aureus strain IVB6164]
MKILFQEIINKVIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI

Nucleotide


Download         Length: 975 bp        

>NTDB_id=672720 MUA75_RS07705 WP_160175981.1 1598599..1599573(-) (comGA) [Staphylococcus aureus strain IVB6164]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGTGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTAATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCTACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAAGATCCTGTAGAGATGCAAATTCCTGGTATTGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(8-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Staphylococcus aureus MW2

99.691

100

0.997
  comGA Staphylococcus aureus N315

99.691

100

0.997