Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA13_RS09610 Genome accession   NZ_CP094787
Coordinates   1964262..1965305 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain IVB6168     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1959262..1970305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA13_RS09580 (MUA13_09570) - 1959684..1960940 (-) 1257 WP_252570181.1 aminopeptidase -
  MUA13_RS09585 (MUA13_09575) - 1960943..1961143 (-) 201 WP_000180460.1 DUF1128 family protein -
  MUA13_RS09590 (MUA13_09580) - 1961290..1961754 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  MUA13_RS09595 (MUA13_09585) - 1961761..1962036 (+) 276 WP_061650057.1 YtxH domain-containing protein -
  MUA13_RS09600 (MUA13_09590) - 1962314..1963531 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  MUA13_RS09605 (MUA13_09595) vraR 1963643..1964272 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  MUA13_RS09610 (MUA13_09600) vraS 1964262..1965305 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  MUA13_RS09615 (MUA13_09605) liaF 1965302..1966003 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  MUA13_RS09620 (MUA13_09610) - 1966018..1966404 (-) 387 WP_001110179.1 hypothetical protein -
  MUA13_RS09625 (MUA13_09615) map 1966621..1967379 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  MUA13_RS09630 (MUA13_09620) - 1967853..1968839 (+) 987 WP_262522385.1 aromatic acid exporter family protein -
  MUA13_RS09635 (MUA13_09625) - 1969270..1969683 (-) 414 WP_252569368.1 hypothetical protein -
  MUA13_RS09640 (MUA13_09630) - 1969712..1969820 (-) 109 Protein_1863 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=672561 MUA13_RS09610 WP_001017131.1 1964262..1965305(-) (vraS) [Staphylococcus aureus strain IVB6168]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=672561 MUA13_RS09610 WP_001017131.1 1964262..1965305(-) (vraS) [Staphylococcus aureus strain IVB6168]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAGTTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGTTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1