Detailed information NTG0067251

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SITYG_RS03370
• Genome accession: NZ_AP014880
• Coordinates: 648415..649446 (+)
• Length: 343 a.a.
• NCBI ID: WP_096362661.1
• Uniprot ID: A0AAD1FJ70
• Organism: Streptococcus intermedius strain TYG1620
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 643415..654446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS03345 (SITYG_06460)	-	643723..644037 (+)	315	WP_020998875.1	PTS cellobiose transporter subunit IIB	-
SITYG_RS03350 (SITYG_06470)	-	644093..646084 (+)	1992	WP_096362658.1	BglG family transcription antiterminator	-
SITYG_RS03355 (SITYG_06480)	-	646097..646414 (+)	318	WP_006267580.1	PTS cellobiose transporter subunit IIA	-
SITYG_RS03360 (SITYG_06490)	-	646437..646943 (+)	507	WP_096362659.1	hypothetical protein	-
SITYG_RS03365 (SITYG_06500)	celB	646983..648326 (+)	1344	WP_096362660.1	PTS cellobiose transporter subunit IIC	-
SITYG_RS03370 (SITYG_06510)	coiA	648415..649446 (+)	1032	WP_096362661.1	competence protein CoiA	Machinery gene
SITYG_RS03375 (SITYG_06520)	pepF	649398..651200 (+)	1803	WP_096362662.1	oligoendopeptidase F	Regulator
SITYG_RS03380 (SITYG_06530)	-	651202..651885 (+)	684	WP_020998869.1	O-methyltransferase	-
SITYG_RS03385 (SITYG_06540)	prsA	651992..652930 (+)	939	WP_003073287.1	peptidylprolyl isomerase PrsA	-
SITYG_RS03395 (SITYG_06550)	-	653155..653640 (+)	486	WP_096362663.1	LURP-one-related/scramblase family protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 40491.83 Da
• Isoelectric Point: 9.2348

>NTDB_id=67251 SITYG_RS03370 WP_096362661.1 648415..649446(+) (coiA) [Streptococcus intermedius strain TYG1620]
MLIACQENGNLLNAVEDTVNPLDKFLCPACLEAVRFKKGRVMRPHFAHISLKDCHFYTENESAEHLNLKAALFTWARKSN
HAVQVEAYLPKLQQIADLLVEKQIALEVQCSSLSQKRLKERTDSYHQHGYHVLWLLGKKLWLKDSLTNLQKDFLYFSQNM
GFYLWELDDKKQELRLKYLIHEDLHGRAQYKVQSFPFGQGSLLTVLRTPFQRQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKLQAELYQAGDNLLTKTASDFYPQVHPVCASSFCQIFQDLTPYYQQFSAYYKKAKNKNLQVLYPPIFYAKIFGSIYDR
IEKTEEILWQNKEMKLKKNILGI

Nucleotide

• Length: 1032 bp

>NTDB_id=67251 SITYG_RS03370 WP_096362661.1 648415..649446(+) (coiA) [Streptococcus intermedius strain TYG1620]
ATGTTAATAGCTTGTCAGGAAAATGGGAACCTACTAAATGCTGTGGAAGATACAGTAAATCCGCTGGATAAATTTCTCTG
TCCAGCTTGTTTGGAGGCGGTCCGTTTTAAAAAAGGAAGAGTCATGCGACCCCATTTTGCTCATATTTCTTTAAAAGACT
GTCATTTTTATACGGAAAATGAAAGCGCAGAACACTTGAATTTGAAAGCTGCTTTGTTTACTTGGGCCAGAAAGTCTAAT
CATGCAGTTCAAGTGGAAGCGTATTTACCTAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAGATTGCGCTTGA
AGTTCAATGCAGTTCACTGAGTCAAAAGCGCTTAAAAGAGCGTACAGACAGTTATCATCAACATGGTTATCATGTTCTTT
GGCTATTAGGAAAGAAACTTTGGCTGAAAGATTCTTTAACTAATTTGCAAAAAGATTTTCTTTATTTCAGTCAAAATATG
GGCTTTTATTTATGGGAATTGGATGATAAAAAGCAGGAGCTTCGGCTCAAGTATCTGATTCACGAAGATTTGCATGGCCG
AGCTCAATATAAGGTCCAGTCTTTTCCTTTTGGTCAGGGCAGCCTTTTGACTGTTCTGCGAACGCCCTTTCAACGGCAGG
AGATGACCAGTTTTTTAGCAAAAGAGGATAAAAATATTTGCCGTTATGTTCGTCAACAGCTCTATTATCAACAACCTAAA
TGGATGAAATTACAGGCAGAACTGTATCAAGCAGGTGATAATTTATTAACCAAAACGGCTAGTGACTTTTATCCGCAGGT
TCATCCGGTTTGTGCCAGCTCTTTCTGTCAAATTTTTCAAGATCTGACTCCTTATTATCAGCAATTTTCAGCTTATTATA
AAAAAGCAAAAAATAAAAATCTCCAAGTTCTCTATCCGCCAATTTTTTATGCAAAGATTTTTGGTAGTATTTATGATAGA
ATAGAAAAGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (23-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	53.822	91.545	0.493
coiA	Streptococcus mitis NCTC 12261	53.822	91.545	0.493
coiA	Streptococcus pneumoniae Rx1	53.503	91.545	0.49
coiA	Streptococcus pneumoniae D39	53.503	91.545	0.49
coiA	Streptococcus pneumoniae R6	53.503	91.545	0.49
coiA	Lactococcus lactis subsp. cremoris KW2	44.136	94.461	0.417