Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIE83_RS19565 Genome accession   NZ_CP109188
Coordinates   4289587..4290711 (-) Length   374 a.a.
NCBI ID   WP_099173610.1    Uniprot ID   A0ABU8A2T9
Organism   Streptomyces sp. NBC_01708     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4284587..4295711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE83_RS19540 (OIE83_19535) cseB 4285306..4286016 (-) 711 WP_124277577.1 two-component system response regulator CseB -
  OIE83_RS19545 (OIE83_19540) - 4286028..4286726 (-) 699 WP_329043468.1 hypothetical protein -
  OIE83_RS19550 (OIE83_19545) - 4286714..4287298 (-) 585 WP_099173607.1 SigE family RNA polymerase sigma factor -
  OIE83_RS19555 (OIE83_19550) - 4287482..4288384 (-) 903 WP_099173608.1 A/G-specific adenine glycosylase -
  OIE83_RS19560 (OIE83_19555) - 4288644..4289468 (+) 825 WP_329208333.1 hypothetical protein -
  OIE83_RS19565 (OIE83_19560) disA 4289587..4290711 (-) 1125 WP_099173610.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE83_RS19570 (OIE83_19565) radA/sms 4290792..4292204 (-) 1413 WP_099173611.1 DNA repair protein RadA Machinery gene
  OIE83_RS19575 (OIE83_19570) - 4292340..4294169 (+) 1830 WP_329210661.1 hypothetical protein -
  OIE83_RS19580 (OIE83_19575) - 4294276..4295118 (-) 843 WP_099173613.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40296.19 Da        Isoelectric Point: 4.8697

>NTDB_id=672398 OIE83_RS19565 WP_099173610.1 4289587..4290711(-) (disA) [Streptomyces sp. NBC_01708]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVDFAATRLR
ELCKLDGAMILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDTLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=672398 OIE83_RS19565 WP_099173610.1 4289587..4290711(-) (disA) [Streptomyces sp. NBC_01708]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGGACGGCCCTCCGCGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGACTGATCGTCC
TCGGCATGGACAAGACCGTCGAATCCATGTGTACGGGCGGATTCGTGCTCGACGTGGATTTCGCCGCAACGCGCCTGCGC
GAACTGTGCAAGCTGGACGGCGCGATGATCCTCGACAAGGACATGACGAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCGACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCCACCCTCGAGCGGTACAAGCTCAGGCTGGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTCTCGCAGCGGCTGGAGATGGTCCGCCGCATCG
CGACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGCCGCCTTCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCCGAGCCCACCGCGAAGCGGTCGCGTACGGTCGACGA
GGCGCTGGCCGAGCTGGACACGCTCACCCACACCGAGCTGCTCGAACTCCCCGTGGTGGCACGCGCCCTGGGCTACAGCG
GCTCCCCGGAGACGCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTCCCCGGAGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGGCCGTGGA
CGGGGTCGGCGAGGCACGGGCCCGCAGCGTCCGGGAGGGACTCTCGCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436