Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA47_RS09945 Genome accession   NZ_CP094773
Coordinates   2015344..2016387 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain IVB6195     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2010344..2021387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA47_RS09915 (MUA47_09915) - 2010763..2012019 (-) 1257 WP_250425878.1 aminopeptidase -
  MUA47_RS09920 (MUA47_09920) - 2012022..2012222 (-) 201 WP_000180460.1 DUF1128 family protein -
  MUA47_RS09925 (MUA47_09925) - 2012369..2012833 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  MUA47_RS09930 (MUA47_09930) - 2012840..2013115 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  MUA47_RS09935 (MUA47_09935) - 2013395..2014612 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  MUA47_RS09940 (MUA47_09940) vraR 2014725..2015354 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  MUA47_RS09945 (MUA47_09945) vraS 2015344..2016387 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  MUA47_RS09950 (MUA47_09950) liaF 2016384..2017085 (-) 702 WP_262634652.1 cell wall-active antibiotics response protein LiaF -
  MUA47_RS09955 (MUA47_09955) - 2017100..2017486 (-) 387 WP_001110179.1 hypothetical protein -
  MUA47_RS09960 (MUA47_09960) map 2017703..2018461 (-) 759 WP_111014375.1 type I methionyl aminopeptidase -
  MUA47_RS09965 (MUA47_09965) - 2019047..2020033 (+) 987 WP_262634653.1 FUSC family protein -
  MUA47_RS09970 (MUA47_09970) - 2020221..2020634 (-) 414 WP_025174666.1 hypothetical protein -
  MUA47_RS09975 (MUA47_09975) - 2020663..2020773 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=672308 MUA47_RS09945 WP_001017131.1 2015344..2016387(-) (vraS) [Staphylococcus aureus strain IVB6195]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=672308 MUA47_RS09945 WP_001017131.1 2015344..2016387(-) (vraS) [Staphylococcus aureus strain IVB6195]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATT
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCGGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1