Detailed information NTG0672262

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OIE74_RS38070
• Genome accession: NZ_CP109181
• Coordinates: 8561351..8562376 (-)
• Length: 341 a.a.
• NCBI ID: WP_329392091.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01716
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 8556351..8567376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE74_RS38035 (OIE74_38060)	-	8556619..8556792 (+)	174	Protein_7520	type I-E CRISPR-associated protein Cas7/Cse4/CasC	-
OIE74_RS38040 (OIE74_38065)	cas5e	8556974..8557768 (+)	795	WP_329392085.1	type I-E CRISPR-associated protein Cas5/CasD	-
OIE74_RS38045 (OIE74_38070)	-	8557765..8557974 (+)	210	WP_329392086.1	type I-E CRISPR-associated protein Cas6/Cse3/CasE	-
OIE74_RS38050 (OIE74_38075)	-	8557941..8558402 (+)	462	WP_329392087.1	type I-E CRISPR-associated protein Cas6/Cse3/CasE	-
OIE74_RS38055 (OIE74_38080)	-	8558430..8560010 (+)	1581	WP_329392088.1	Mu transposase C-terminal domain-containing protein	-
OIE74_RS38060 (OIE74_38085)	-	8560301..8560630 (-)	330	WP_329392089.1	hypothetical protein	-
OIE74_RS38065 (OIE74_38090)	-	8560844..8561074 (+)	231	WP_329392090.1	DUF4387 family protein	-
OIE74_RS38070 (OIE74_38095)	cytR	8561351..8562376 (-)	1026	WP_329392091.1	LacI family DNA-binding transcriptional regulator	Regulator
OIE74_RS38075 (OIE74_38100)	-	8562688..8564055 (+)	1368	WP_329392092.1	extracellular solute-binding protein	-
OIE74_RS38080 (OIE74_38105)	-	8564153..8565061 (+)	909	WP_329392093.1	sugar ABC transporter permease	-
OIE74_RS38085 (OIE74_38110)	-	8565064..8565951 (+)	888	WP_329392094.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36659.78 Da
• Isoelectric Point: 6.2858

>NTDB_id=672262 OIE74_RS38070 WP_329392091.1 8561351..8562376(-) (cytR) [Streptomyces sp. NBC_01716]
MAGARLKDVAERAGVSIKTVSNVVRGEARVAEPTRHRVLRAIAELGYQPNASARHLRTGRSGIIALAVPELVAPYFAELA
AEVIAAAKKRGCTVLIEDTGGDPAEELRIACGLSDPLIDGVLLSPLYLDETMLANRERRVPLVLLGEQSYKIPADHVLID
NSAAARDATEHLLQLGRRSIAVIGQPSDRAHATTVQRMHGFLTALHEAGVPHDPRLVPDTAAFTRADGAAAMRVLLALDD
PPDAVFCFSDLLASGAVRAAYEHGLRVPEDLAVVGFDDIQETRYSVPSLTTVSPDKREIAELAVNAVLHRITADAEAPHT
RLTAGYELVVRESTRAREQGR

Nucleotide

• Length: 1026 bp

>NTDB_id=672262 OIE74_RS38070 WP_329392091.1 8561351..8562376(-) (cytR) [Streptomyces sp. NBC_01716]
ATGGCAGGCGCACGCCTCAAGGACGTCGCCGAGCGCGCGGGCGTATCGATCAAGACGGTCTCCAACGTCGTACGAGGAGA
GGCCCGAGTCGCGGAACCGACCCGGCACCGTGTCCTGCGTGCCATAGCTGAACTCGGCTACCAGCCCAACGCCTCCGCCC
GGCACCTGCGCACGGGCCGTAGCGGCATCATCGCGCTGGCCGTCCCCGAACTGGTCGCGCCCTACTTCGCTGAGCTCGCC
GCAGAGGTCATCGCGGCCGCCAAGAAGCGCGGCTGCACCGTACTCATCGAAGACACCGGGGGCGACCCGGCGGAGGAACT
GCGCATCGCCTGCGGGCTCAGCGACCCGCTCATCGACGGCGTGCTGCTCAGTCCGCTCTACCTTGACGAGACGATGCTCG
CCAACCGCGAGCGCCGCGTACCCCTCGTGCTGCTCGGCGAGCAGTCGTACAAAATTCCGGCGGACCACGTCCTGATCGAC
AACTCCGCGGCGGCACGGGACGCGACCGAGCACCTGCTGCAGCTCGGACGGCGCAGCATCGCAGTCATCGGACAGCCGTC
GGACCGGGCCCATGCGACGACAGTGCAGCGCATGCACGGCTTCCTGACCGCGCTGCACGAGGCAGGCGTCCCGCACGACC
CCCGACTGGTCCCGGACACCGCGGCGTTCACCCGCGCCGACGGGGCCGCCGCCATGAGGGTCCTGCTCGCTCTGGACGAC
CCTCCGGACGCCGTCTTCTGCTTCAGCGACCTGCTCGCCTCGGGCGCCGTGCGCGCGGCCTACGAACACGGCCTGCGAGT
GCCAGAGGACCTGGCGGTCGTGGGCTTCGACGACATCCAGGAGACCCGCTACAGCGTCCCCTCACTGACCACCGTCTCGC
CGGACAAGAGGGAGATCGCCGAACTGGCCGTGAACGCCGTGCTGCACAGGATCACCGCCGACGCGGAGGCCCCTCACACG
CGACTCACAGCGGGGTACGAACTGGTCGTGCGGGAGAGCACGCGGGCCAGGGAGCAGGGGCGCTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (6-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (169-334)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	38.253	97.361	0.372
cytR	Vibrio parahaemolyticus RIMD 2210633	37.651	97.361	0.367