Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OIE74_RS26770 Genome accession   NZ_CP109181
Coordinates   6075002..6076735 (-) Length   577 a.a.
NCBI ID   WP_329387972.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01716     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6070002..6081735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE74_RS26760 (OIE74_26775) - 6071606..6072799 (+) 1194 WP_329387967.1 sigma-70 family RNA polymerase sigma factor -
  OIE74_RS26765 (OIE74_26780) rcrQ 6073068..6075002 (-) 1935 WP_329387969.1 ABC transporter ATP-binding protein Regulator
  OIE74_RS26770 (OIE74_26785) rcrP 6075002..6076735 (-) 1734 WP_329387972.1 ABC transporter ATP-binding protein Regulator
  OIE74_RS26775 (OIE74_26790) - 6076915..6078366 (-) 1452 WP_329387974.1 FGGY family carbohydrate kinase -
  OIE74_RS26780 (OIE74_26795) - 6078444..6078740 (-) 297 WP_329387976.1 YtxH domain-containing protein -
  OIE74_RS26800 (OIE74_26815) - 6079858..6080025 (+) 168 WP_329387978.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62759.66 Da        Isoelectric Point: 5.5502

>NTDB_id=672242 OIE74_RS26770 WP_329387972.1 6075002..6076735(-) (rcrP) [Streptomyces sp. NBC_01716]
MLLRLLRTHLAPYRTAIGLLVAFQFLQTCASLYLPTLNADIIDNGVVKGDTGYIMEFGGLMIAVSVVQVLGQIGAVYYGS
RTASALGRDVRAAIFDRVQSFSAREVGQFGAPSLITRTTNDVQQVQMLVLMSFTLMVSAPIMCVGGIVMALGQDVPLSAV
LLAVVPVLGISVSLIVKRMRPLFRSMQERLDTVNRVLREQITGNRVIRAFVRDEYEKERFKGANTDLTEMSLATGRLMAL
MFPVVMTVVNVSSVAVVWFGAHRIDSGGMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLDTRSSVVP
PKDPVRTLRRHGHLEVRGAEFRYPGAEEPVLREVSLTARPGETTAVIGSTGSGKSTLLGLVPRLVDATSGEVLVDGEDVR
GLDPALLARTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALDVAQAKEFVTDLEGGLNAPVSQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAEATVVIVAQRVSTIRDADRIIVMDEGRVVGEGHHHELMAEN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=672242 OIE74_RS26770 WP_329387972.1 6075002..6076735(-) (rcrP) [Streptomyces sp. NBC_01716]
GTGCTTCTACGACTACTCAGAACGCATCTGGCCCCCTACAGAACGGCCATCGGTCTGCTGGTGGCTTTCCAGTTCCTTCA
GACCTGTGCCTCCCTCTATCTGCCCACCCTCAACGCCGACATCATCGACAACGGTGTCGTGAAGGGGGACACGGGTTACA
TCATGGAGTTCGGCGGTCTCATGATCGCCGTCAGCGTCGTCCAGGTCCTCGGCCAGATAGGCGCTGTCTACTACGGATCG
CGCACCGCGTCGGCCCTCGGCCGTGACGTGCGGGCCGCGATATTCGACCGGGTGCAGAGCTTCTCCGCCCGCGAGGTCGG
CCAGTTCGGCGCGCCGTCGCTGATCACGCGTACGACCAACGACGTCCAGCAGGTGCAGATGCTGGTCCTGATGTCGTTCA
CGCTGATGGTGTCGGCCCCGATCATGTGCGTCGGCGGCATCGTCATGGCGCTCGGTCAGGACGTGCCCCTGTCGGCGGTG
CTGCTCGCCGTCGTGCCGGTGCTCGGTATCTCGGTGAGCCTGATCGTCAAGCGGATGCGCCCGCTGTTCCGCTCCATGCA
GGAGCGGCTGGACACGGTGAACCGGGTGCTGCGTGAGCAGATAACCGGCAACCGCGTCATCCGGGCCTTCGTACGCGACG
AGTACGAGAAGGAGCGGTTCAAGGGCGCCAACACCGACCTCACCGAGATGTCGTTGGCGACCGGCCGGCTGATGGCGCTG
ATGTTCCCGGTGGTGATGACCGTCGTGAACGTGTCGTCGGTCGCCGTCGTCTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGGATGCAGATCGGCGCGCTGACCGCGTTCCTCGCGTATCTCATGCAGATCGTGATGGCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGTGCCGAGCGCATCGAGGAGGTGCTGGACACCAGGTCGAGCGTCGTCCCG
CCGAAGGACCCCGTGCGGACACTGCGCCGGCACGGTCATCTGGAGGTGCGGGGCGCGGAGTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGCGTGAGGTGTCACTGACCGCGAGACCGGGCGAGACGACCGCCGTGATCGGCTCGACCGGCAGCGGAA
AGTCCACCCTGCTCGGGCTGGTGCCCCGGCTGGTCGACGCGACCTCCGGCGAGGTGCTGGTGGACGGGGAGGACGTACGC
GGACTCGATCCCGCCCTGCTGGCCAGGACGGTCAGTCTGGTGCCGCAGAAGCCGTATCTCTTCTCGGGGACGGTGGCGAC
GAATCTGCGGTACGGCAATCCGGACGCGACCGACGAGGAGCTGTGGCACGCGCTCGATGTCGCGCAGGCCAAGGAGTTCG
TCACCGATCTGGAGGGCGGGCTGAACGCGCCTGTCTCGCAGGGCGGTACGAACGTGTCCGGCGGTCAGCGCCAGCGCCTC
GCCATCGCGCGGACGCTGGTGCAGCGGCCGGAGATCTATCTCTTCGACGACTCGTTCTCCGCGCTGGACTACGCGACGGA
CGCGGCGCTGCGTGCCGCCCTGGCGCGTGAGACCGCCGAGGCCACGGTGGTGATCGTCGCCCAGCGGGTGTCCACCATCC
GCGACGCCGACCGGATCATCGTCATGGACGAGGGCCGGGTGGTCGGTGAGGGGCATCATCACGAGCTGATGGCGGAGAAC
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACCGAGGCGGAGGCGGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(19-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.311

100

0.404