Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA35_RS09970 Genome accession   NZ_CP094770
Coordinates   1992992..1994035 (-) Length   347 a.a.
NCBI ID   WP_262607610.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6201     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1987992..1999035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA35_RS09940 (MUA35_09905) - 1988410..1989666 (-) 1257 WP_001793428.1 aminopeptidase -
  MUA35_RS09945 (MUA35_09910) - 1989669..1989869 (-) 201 WP_000180462.1 DUF1128 family protein -
  MUA35_RS09950 (MUA35_09915) - 1990016..1990480 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  MUA35_RS09955 (MUA35_09920) - 1990487..1990762 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  MUA35_RS09960 (MUA35_09925) - 1991040..1992257 (+) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  MUA35_RS09965 (MUA35_09930) vraR 1992373..1993002 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  MUA35_RS09970 (MUA35_09935) vraS 1992992..1994035 (-) 1044 WP_262607610.1 sensor histidine kinase Regulator
  MUA35_RS09975 (MUA35_09940) liaF 1994032..1994733 (-) 702 WP_262607611.1 cell wall-active antibiotics response protein LiaF -
  MUA35_RS09980 (MUA35_09945) - 1994748..1995134 (-) 387 WP_001110179.1 hypothetical protein -
  MUA35_RS09985 (MUA35_09950) map 1995351..1996109 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  MUA35_RS09990 (MUA35_09955) - 1996638..1997624 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  MUA35_RS09995 (MUA35_09960) - 1997998..1998411 (-) 414 WP_262608065.1 hypothetical protein -
  MUA35_RS10000 (MUA35_09965) - 1998441..1998553 (-) 113 Protein_1931 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40071.55 Da        Isoelectric Point: 6.0577

>NTDB_id=672226 MUA35_RS09970 WP_262607610.1 1992992..1994035(-) (vraS) [Staphylococcus aureus strain IVB6201]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYNETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=672226 MUA35_RS09970 WP_262607610.1 1992992..1994035(-) (vraS) [Staphylococcus aureus strain IVB6201]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAATGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCTCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997