Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHB49_RS23945 Genome accession   NZ_CP109178
Coordinates   5278752..5279876 (-) Length   374 a.a.
NCBI ID   WP_329162879.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01717     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5273752..5284876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB49_RS23920 (OHB49_23960) - 5274530..5275141 (-) 612 WP_199919198.1 hypothetical protein -
  OHB49_RS23925 (OHB49_23965) - 5275210..5275860 (-) 651 WP_329162871.1 SigE family RNA polymerase sigma factor -
  OHB49_RS23930 (OHB49_23970) - 5276036..5276938 (-) 903 WP_030972383.1 A/G-specific adenine glycosylase -
  OHB49_RS23935 (OHB49_23975) - 5277064..5277276 (-) 213 WP_329162875.1 hypothetical protein -
  OHB49_RS23940 (OHB49_23980) - 5277782..5278591 (+) 810 WP_329162877.1 hypothetical protein -
  OHB49_RS23945 (OHB49_23985) disA 5278752..5279876 (-) 1125 WP_329162879.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB49_RS23950 (OHB49_23990) radA/sms 5279957..5281369 (-) 1413 WP_329162881.1 DNA repair protein RadA Machinery gene
  OHB49_RS23955 (OHB49_23995) - 5281558..5283393 (+) 1836 WP_329162883.1 hypothetical protein -
  OHB49_RS23960 (OHB49_24000) - 5283426..5284295 (-) 870 WP_030972393.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40405.30 Da        Isoelectric Point: 4.8644

>NTDB_id=672146 OHB49_RS23945 WP_329162879.1 5278752..5279876(-) (disA) [Streptomyces sp. NBC_01717]
MAASDRASSPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=672146 OHB49_RS23945 WP_329162879.1 5278752..5279876(-) (disA) [Streptomyces sp. NBC_01717]
GTGGCAGCCAGCGACCGGGCATCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGTGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTAGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAACTGGTCGTGCGTGACTACGTACCGGAGCCGACCGCCAAGCGGTCACGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAGCTGCTCGAACTGCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GATCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCAGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433