Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA83_RS10385 Genome accession   NZ_CP094763
Coordinates   2100974..2101690 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain IVB6221     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2095974..2106690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA83_RS10355 (MUA83_10350) - 2096190..2096816 (+) 627 WP_262529040.1 nitroreductase family protein -
  MUA83_RS10360 (MUA83_10355) - 2097178..2097963 (+) 786 WP_000867945.1 carbon-nitrogen family hydrolase -
  MUA83_RS10365 (MUA83_10360) hld 2098562..2098642 (-) 81 WP_000046022.1 delta-hemolysin -
  MUA83_RS10370 (MUA83_10365) - 2098933..2099496 (+) 564 WP_001105699.1 accessory gene regulator AgrB -
  MUA83_RS10375 (MUA83_10370) agrD 2099499..2099642 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  MUA83_RS10380 (MUA83_10375) agrC 2099672..2100955 (+) 1284 WP_000447894.1 quorum-sensing sensor histidine kinase AgrC -
  MUA83_RS10385 (MUA83_10380) agrA 2100974..2101690 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  MUA83_RS10390 (MUA83_10385) - 2101762..2101869 (+) 108 WP_001803734.1 hypothetical protein -
  MUA83_RS10395 (MUA83_10390) - 2102057..2103016 (-) 960 WP_262529043.1 carbohydrate kinase -
  MUA83_RS10400 (MUA83_10395) - 2103013..2104497 (-) 1485 WP_262529045.1 sucrose-6-phosphate hydrolase -
  MUA83_RS10405 (MUA83_10400) - 2104646..2105596 (-) 951 WP_262529048.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=672096 MUA83_RS10385 WP_000688492.1 2100974..2101690(+) (agrA) [Staphylococcus aureus strain IVB6221]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=672096 MUA83_RS10385 WP_000688492.1 2100974..2101690(+) (agrA) [Staphylococcus aureus strain IVB6221]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAACATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1