Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | KNN_RS30160 | Genome accession | NZ_AP014864 |
| Coordinates | 5855950..5856234 (+) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5850950..5861234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KNN_RS30145 (KNN_06227) | rnmV | 5851776..5852333 (-) | 558 | WP_000692835.1 | ribonuclease M5 | - |
| KNN_RS30150 (KNN_06228) | - | 5852548..5853315 (-) | 768 | WP_000895851.1 | TatD family hydrolase | - |
| KNN_RS30155 (KNN_06229) | metG | 5853482..5855491 (-) | 2010 | WP_071732546.1 | methionine--tRNA ligase | - |
| KNN_RS30160 (KNN_06230) | abrB | 5855950..5856234 (+) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| KNN_RS30165 (KNN_06231) | rsmI | 5856255..5857130 (-) | 876 | WP_000267821.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| KNN_RS30170 (KNN_06232) | - | 5857099..5857389 (-) | 291 | WP_060852506.1 | GIY-YIG nuclease family protein | - |
| KNN_RS30175 (KNN_06233) | - | 5857376..5858116 (-) | 741 | WP_001055366.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| KNN_RS30180 (KNN_06234) | yabA | 5858199..5858549 (-) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| KNN_RS30185 (KNN_06235) | - | 5858564..5859391 (-) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| KNN_RS30190 (KNN_06236) | holB | 5859397..5860380 (-) | 984 | WP_000978577.1 | DNA polymerase III subunit delta' | - |
| KNN_RS30195 (KNN_06237) | tmk | 5860416..5861042 (-) | 627 | WP_000677221.1 | dTMP kinase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=67206 KNN_RS30160 WP_000843036.1 5855950..5856234(+) (abrB) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=67206 KNN_RS30160 WP_000843036.1 5855950..5856234(+) (abrB) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |