Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGB   Type   Machinery gene
Locus tag   MUA14_RS07510 Genome accession   NZ_CP094760
Coordinates   1574439..1575509 (-) Length   356 a.a.
NCBI ID   WP_000776413.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6232     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1569439..1580509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA14_RS07470 (MUA14_07460) gcvPA 1569616..1570962 (-) 1347 WP_262541341.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  MUA14_RS07475 (MUA14_07465) gcvT 1570982..1572073 (-) 1092 WP_000093354.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA14_RS07480 (MUA14_07470) - 1572232..1572756 (-) 525 WP_001015120.1 shikimate kinase -
  MUA14_RS07485 (MUA14_07475) - 1572746..1572892 (-) 147 WP_001789879.1 hypothetical protein -
  MUA14_RS07490 (MUA14_07480) comGF 1572989..1573486 (-) 498 WP_001825340.1 competence type IV pilus minor pilin ComGF Machinery gene
  MUA14_RS07495 (MUA14_07485) comGE 1573404..1573703 (-) 300 WP_000844413.1 hypothetical protein Machinery gene
  MUA14_RS07500 (MUA14_07490) comGD 1573690..1574136 (-) 447 WP_072357807.1 competence type IV pilus minor pilin ComGD Machinery gene
  MUA14_RS07505 (MUA14_07495) comGC 1574114..1574425 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA14_RS07510 (MUA14_07500) comGB 1574439..1575509 (-) 1071 WP_000776413.1 competence type IV pilus assembly protein ComGB Machinery gene
  MUA14_RS07515 (MUA14_07505) comGA 1575481..1576455 (-) 975 WP_216805596.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA14_RS07520 (MUA14_07510) - 1576507..1577130 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  MUA14_RS07525 (MUA14_07515) - 1577127..1577456 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  MUA14_RS07530 (MUA14_07520) - 1577456..1578442 (-) 987 WP_000161315.1 ROK family glucokinase -
  MUA14_RS07535 (MUA14_07525) - 1578439..1578642 (-) 204 WP_000087561.1 YqgQ family protein -
  MUA14_RS07540 (MUA14_07530) - 1578623..1580086 (-) 1464 WP_044122531.1 rhomboid family intramembrane serine protease -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41475.94 Da        Isoelectric Point: 10.1030

>NTDB_id=672043 MUA14_RS07510 WP_000776413.1 1574439..1575509(-) (comGB) [Staphylococcus aureus strain IVB6232]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILISIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=672043 MUA14_RS07510 WP_000776413.1 1574439..1575509(-) (comGB) [Staphylococcus aureus strain IVB6232]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGCACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATAATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAATTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATCCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAGTTAATTTACAACAAATTGAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAATTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(227-347)

Type II secretion system (T2SS), protein F (T2SSF)

(27-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGB Staphylococcus aureus MW2

99.438

100

0.994
  comGB Staphylococcus aureus N315

99.438

100

0.994