Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KNN_RS23500 Genome accession   NZ_AP014864
Coordinates   4589716..4589892 (-) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4584716..4594892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNN_RS23480 (KNN_04845) - 4585340..4586086 (-) 747 WP_000966127.1 YjbA family protein -
  KNN_RS23485 (KNN_04846) - 4586230..4587018 (-) 789 WP_000513279.1 DUF2268 domain-containing putative Zn-dependent protease -
  KNN_RS23490 (KNN_04847) fabF 4587125..4588363 (-) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  KNN_RS23495 (KNN_04848) fabH 4588395..4589327 (-) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  KNN_RS23500 (KNN_04849) comZ 4589716..4589892 (-) 177 WP_001986215.1 ComZ family protein Regulator
  KNN_RS23505 (KNN_04850) - 4589947..4590819 (-) 873 WP_002164601.1 NAD(P)-dependent oxidoreductase -
  KNN_RS23510 (KNN_04851) - 4590849..4591583 (-) 735 WP_000028712.1 hydrolase -
  KNN_RS23515 (KNN_04852) - 4591740..4591922 (+) 183 WP_001211116.1 YjzD family protein -
  KNN_RS23520 (KNN_04853) clpC 4591961..4594561 (-) 2601 WP_000365403.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=67194 KNN_RS23500 WP_001986215.1 4589716..4589892(-) (comZ) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=67194 KNN_RS23500 WP_001986215.1 4589716..4589892(-) (comZ) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment