Detailed information NTG0671928

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OIE75_RS02100
• Genome accession: NZ_CP109171
• Coordinates: 459733..460746 (+)
• Length: 337 a.a.
• NCBI ID: WP_307009135.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01723
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 454733..465746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE75_RS02085 (OIE75_02090)	-	456193..457116 (-)	924	WP_329469228.1	carbohydrate ABC transporter permease	-
OIE75_RS02090 (OIE75_02095)	-	457129..458070 (-)	942	WP_307009132.1	sugar ABC transporter permease	-
OIE75_RS02095 (OIE75_02100)	-	458166..459476 (-)	1311	WP_307009133.1	extracellular solute-binding protein	-
OIE75_RS02100 (OIE75_02105)	cytR	459733..460746 (+)	1014	WP_307009135.1	LacI family DNA-binding transcriptional regulator	Regulator
OIE75_RS02105 (OIE75_02110)	-	460789..461589 (-)	801	WP_329473918.1	inositol monophosphatase family protein	-
OIE75_RS02110 (OIE75_02115)	-	461719..462561 (+)	843	WP_307009136.1	class I SAM-dependent methyltransferase	-
OIE75_RS02115 (OIE75_02120)	-	462622..463068 (-)	447	WP_329469229.1	nuclear transport factor 2 family protein	-
OIE75_RS02120 (OIE75_02125)	-	463233..463436 (+)	204	WP_329469230.1	hypothetical protein	-
OIE75_RS02125 (OIE75_02130)	-	463607..464461 (+)	855	WP_329469231.1	glycerophosphodiester phosphodiesterase family protein	-
OIE75_RS02130 (OIE75_02135)	-	464592..464936 (+)	345	WP_307017682.1	hypothetical protein	-
OIE75_RS02135 (OIE75_02140)	-	464953..465675 (-)	723	WP_307009143.1	sulfite exporter TauE/SafE family protein	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 35854.82 Da
• Isoelectric Point: 7.0833

>NTDB_id=671928 OIE75_RS02100 WP_307009135.1 459733..460746(+) (cytR) [Streptomyces sp. NBC_01723]
MTGNRRPTIKTVAARAGVGRTTVSRVVNGSELVSADARARVLAAIKELNYVPNSVARGLVTNRTDAVALVIPESESRLGS
EPFFAALIRGVSGALAESRTQLQLMLVRDQAERDQLTDSVAARRVDGVLLVSVHSEDRLPGMLEEMGLPTVLAGRRDAGE
RLSYVNADNAGGAAAAVRHLLSGGRERIATITGPLDMDVGRSRLAGWRDAHLEAGAPAAEVLVEAGDFTEEGGARAMRLL
LERAPDLDAVFAASDLMAVGALAELRRHGRRVPGDVAVVGFEDSVLARHTDPPLTTVRQPVEELGRTMARILTGITRHGA
PRQQLTLPTELVVRESS

Nucleotide

• Length: 1014 bp

>NTDB_id=671928 OIE75_RS02100 WP_307009135.1 459733..460746(+) (cytR) [Streptomyces sp. NBC_01723]
ATGACCGGCAACCGCCGTCCCACGATCAAAACGGTCGCCGCCCGAGCCGGCGTGGGCCGCACCACCGTCTCCCGCGTCGT
CAACGGCTCGGAGCTGGTCAGTGCCGACGCCCGCGCCAGGGTCCTCGCGGCGATCAAGGAACTGAACTACGTTCCCAACT
CGGTGGCCCGCGGGCTCGTCACCAACCGCACCGACGCCGTGGCCCTGGTGATCCCGGAGTCCGAGAGCAGGCTCGGCTCG
GAACCGTTCTTCGCCGCGCTGATCCGCGGCGTCAGCGGTGCACTCGCCGAGAGCCGGACCCAGCTCCAGCTGATGCTCGT
ACGCGACCAGGCGGAGCGGGACCAGCTGACCGATTCGGTCGCGGCCCGCCGGGTCGACGGCGTCCTCCTGGTCTCGGTGC
ACTCCGAGGACCGGCTGCCCGGCATGCTGGAGGAGATGGGCCTGCCCACCGTCCTGGCCGGTCGCCGCGACGCGGGCGAG
CGGCTGAGCTACGTCAACGCGGACAACGCCGGCGGGGCCGCCGCGGCGGTGCGGCACCTGCTGAGCGGCGGACGGGAGCG
GATCGCGACCATCACCGGGCCGCTGGACATGGACGTCGGCCGCAGCCGGCTCGCGGGCTGGCGGGACGCGCACCTGGAGG
CGGGGGCGCCCGCCGCGGAAGTCCTGGTGGAGGCGGGCGACTTCACCGAGGAGGGCGGGGCGCGCGCGATGCGTTTGCTT
CTTGAACGTGCCCCCGACCTGGACGCCGTCTTCGCGGCCTCGGACCTCATGGCGGTCGGCGCCCTGGCCGAACTCCGCCG
GCACGGGCGGCGGGTGCCCGGCGACGTCGCCGTGGTCGGATTCGAGGACTCCGTCCTCGCCCGGCACACGGACCCACCGC
TCACGACGGTGCGTCAGCCGGTGGAGGAGCTGGGACGGACCATGGCCCGCATCCTCACCGGCATCACCCGGCACGGCGCG
CCACGGCAGCAGTTGACGCTTCCGACGGAGCTGGTGGTGCGCGAGTCGTCCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-337)

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.103	100	0.374
cytR	Vibrio cholerae C6706	35.569	100	0.362