Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   KNN_RS23415 Genome accession   NZ_AP014864
Coordinates   4570625..4571308 (-) Length   227 a.a.
NCBI ID   WP_060852307.1    Uniprot ID   -
Organism   Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4565625..4576308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNN_RS23400 (KNN_04829) pepF 4565806..4567632 (-) 1827 WP_000003349.1 oligoendopeptidase F Regulator
  KNN_RS23405 (KNN_04830) - 4567683..4568927 (-) 1245 WP_000628313.1 competence protein CoiA family protein -
  KNN_RS23410 (KNN_04831) - 4569008..4570552 (-) 1545 WP_000799194.1 cardiolipin synthase -
  KNN_RS23415 (KNN_04832) mecA 4570625..4571308 (-) 684 WP_060852307.1 adaptor protein MecA Regulator
  KNN_RS23420 (KNN_04833) - 4571654..4572328 (+) 675 WP_000362607.1 TerC family protein -
  KNN_RS23425 (KNN_04834) spx 4572378..4572773 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  KNN_RS23430 (KNN_04835) - 4573367..4573570 (+) 204 WP_000559971.1 hypothetical protein -
  KNN_RS23435 (KNN_04836) - 4573601..4575247 (-) 1647 WP_060852308.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=67191 KNN_RS23415 WP_060852307.1 4570625..4571308(-) (mecA) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSVILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=67191 KNN_RS23415 WP_060852307.1 4570625..4571308(-) (mecA) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TGTTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.263

100

0.555

Multiple sequence alignment