Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KNN_RS08575 Genome accession   NZ_AP014864
Coordinates   1602412..1602870 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1597412..1607870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNN_RS08550 (KNN_01770) - 1597567..1599108 (-) 1542 WP_000449912.1 MDR family MFS transporter -
  KNN_RS08555 (KNN_01771) - 1599521..1600021 (+) 501 WP_000708120.1 hypothetical protein -
  KNN_RS08560 (KNN_01772) - 1600053..1600286 (-) 234 WP_000939448.1 SPP1 phage holin family protein -
  KNN_RS08565 (KNN_01773) - 1600450..1601103 (+) 654 WP_000680810.1 diguanylate cyclase -
  KNN_RS08570 (KNN_01774) - 1601718..1602380 (+) 663 WP_000922498.1 YkyA family protein -
  KNN_RS08575 (KNN_01775) kre 1602412..1602870 (-) 459 WP_000804864.1 YkyB family protein Regulator
  KNN_RS08580 (KNN_01776) - 1603012..1604586 (+) 1575 WP_060851783.1 Ppx/GppA family phosphatase -
  KNN_RS08585 (KNN_01777) - 1604695..1606803 (+) 2109 WP_060851784.1 polyphosphate kinase -
  KNN_RS08590 (KNN_01778) - 1606965..1607201 (-) 237 WP_000283738.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=67179 KNN_RS08575 WP_000804864.1 1602412..1602870(-) (kre) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=67179 KNN_RS08575 WP_000804864.1 1602412..1602870(-) (kre) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment