Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA20_RS06210 | Genome accession | NZ_CP094742 |
| Coordinates | 1203674..1204648 (+) | Length | 324 a.a. |
| NCBI ID | WP_262620415.1 | Uniprot ID | - |
| Organism | Staphylococcus chromogenes strain IVB6199 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1198674..1209648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA20_RS06175 (MUA20_06130) | rpmG | 1199128..1199292 (+) | 165 | WP_255201399.1 | 50S ribosomal protein L33 | - |
| MUA20_RS06180 (MUA20_06135) | - | 1199488..1200027 (+) | 540 | WP_262620410.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA20_RS06185 (MUA20_06140) | - | 1200045..1201484 (+) | 1440 | WP_262620411.1 | rhomboid family intramembrane serine protease | - |
| MUA20_RS06190 (MUA20_06145) | - | 1201486..1201689 (+) | 204 | WP_037573910.1 | YqgQ family protein | - |
| MUA20_RS06195 (MUA20_06150) | - | 1201686..1202672 (+) | 987 | WP_262620412.1 | ROK family glucokinase | - |
| MUA20_RS06200 (MUA20_06155) | - | 1202673..1202984 (+) | 312 | WP_262620413.1 | MTH1187 family thiamine-binding protein | - |
| MUA20_RS06205 (MUA20_06160) | - | 1202998..1203621 (+) | 624 | WP_262620414.1 | MBL fold metallo-hydrolase | - |
| MUA20_RS06210 (MUA20_06165) | comGA | 1203674..1204648 (+) | 975 | WP_262620415.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA20_RS06215 (MUA20_06170) | comGB | 1204877..1205692 (+) | 816 | WP_262620416.1 | competence type IV pilus assembly protein ComGB | - |
| MUA20_RS06220 (MUA20_06175) | comGC | 1205707..1206024 (+) | 318 | WP_262620417.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA20_RS06225 (MUA20_06180) | comGD | 1205978..1206445 (+) | 468 | WP_262620418.1 | competence type IV pilus minor pilin ComGD | - |
| MUA20_RS06230 (MUA20_06185) | - | 1206638..1207123 (+) | 486 | WP_262620419.1 | competence type IV pilus minor pilin ComGF | - |
| MUA20_RS06235 (MUA20_06190) | - | 1207288..1207812 (+) | 525 | WP_262620420.1 | shikimate kinase | - |
| MUA20_RS06240 (MUA20_06195) | gcvT | 1207965..1209056 (+) | 1092 | WP_262620421.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37130.90 Da Isoelectric Point: 7.8336
>NTDB_id=671762 MUA20_RS06210 WP_262620415.1 1203674..1204648(+) (comGA) [Staphylococcus chromogenes strain IVB6199]
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKRDLIQSLNMIVNQRLITTKNNDRRLVYENMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKRDLIQSLNMIVNQRLITTKNNDRRLVYENMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
Nucleotide
Download Length: 975 bp
>NTDB_id=671762 MUA20_RS06210 WP_262620415.1 1203674..1204648(+) (comGA) [Staphylococcus chromogenes strain IVB6199]
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTCCACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGAATAAAAGATAACTTAAAGACATTTGACACTCTGAATCTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAACTTTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGCACTGAAAGTTGTGTAATAAGAATAACACCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGTCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGCATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACAATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACGAGATTTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAAACATGACAAGTTTAGATATTCAATACTTTCTAAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTCCACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGAATAAAAGATAACTTAAAGACATTTGACACTCTGAATCTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAACTTTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGCACTGAAAGTTGTGTAATAAGAATAACACCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGTCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGCATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACAATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACGAGATTTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAAACATGACAAGTTTAGATATTCAATACTTTCTAAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
57.895 |
99.691 |
0.577 |
| comGA | Staphylococcus aureus N315 |
57.895 |
99.691 |
0.577 |