Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MUA20_RS00595 Genome accession   NZ_CP094742
Coordinates   117943..118608 (+) Length   221 a.a.
NCBI ID   WP_262621253.1    Uniprot ID   -
Organism   Staphylococcus chromogenes strain IVB6199     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 112943..123608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA20_RS00565 (MUA20_00565) - 113983..114588 (+) 606 WP_262621246.1 response regulator transcription factor -
  MUA20_RS00570 (MUA20_00570) - 114734..115642 (+) 909 WP_262621247.1 ABC transporter ATP-binding protein -
  MUA20_RS00575 (MUA20_00575) - 115642..116391 (+) 750 WP_262621248.1 hypothetical protein -
  MUA20_RS00580 (MUA20_00580) - 116414..117316 (+) 903 WP_105965797.1 sensor histidine kinase KdpD -
  MUA20_RS00585 (MUA20_00585) - 117376..117561 (-) 186 WP_262621249.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  MUA20_RS00590 (MUA20_00590) - 117589..117813 (-) 225 WP_262621251.1 hypothetical protein -
  MUA20_RS00595 (MUA20_00595) braR 117943..118608 (+) 666 WP_262621253.1 response regulator transcription factor Regulator
  MUA20_RS00600 (MUA20_00600) - 118589..119527 (+) 939 Protein_118 sensor histidine kinase -
  MUA20_RS00605 (MUA20_00605) - 119617..120366 (+) 750 WP_262621254.1 ABC transporter ATP-binding protein -
  MUA20_RS00610 (MUA20_00610) - 120368..122350 (+) 1983 WP_262621255.1 FtsX-like permease family protein -
  MUA20_RS00615 (MUA20_00615) - 122396..123022 (-) 627 WP_262621256.1 FMN-dependent NADH-azoreductase -
  MUA20_RS00620 (MUA20_00620) spn 123258..123578 (-) 321 WP_262621257.1 SPIN family peroxidase inhibitor -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25883.05 Da        Isoelectric Point: 5.6985

>NTDB_id=671746 MUA20_RS00595 WP_262621253.1 117943..118608(+) (braR) [Staphylococcus chromogenes strain IVB6199]
MKIMIVEDDFTIANSLVQELRKWNHEAINVQDYIHIKDRFLEMQPHLILLDINLPNFNGFHWWQEIRKASNVPIIFISSA
SDNMNQMMAMQMGADDFIEKPFNLNLTIMKIQALLRRSYDFKVEQTELNVKGCQLITEKALLTYEGQTVSLTLTELQILQ
LLFLNEDQFVSRNALIEQCWQSENFIDDNTLAVNMSRLRKKLKQLGLTELIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=671746 MUA20_RS00595 WP_262621253.1 117943..118608(+) (braR) [Staphylococcus chromogenes strain IVB6199]
ATGAAGATTATGATTGTTGAAGATGATTTCACGATTGCCAATAGTTTAGTGCAAGAATTACGTAAGTGGAATCATGAAGC
GATAAATGTTCAAGACTATATACATATTAAAGACCGTTTTTTAGAAATGCAACCGCACTTAATTTTATTAGATATTAACC
TCCCGAATTTCAACGGTTTCCACTGGTGGCAGGAAATACGTAAAGCGTCAAACGTCCCTATTATTTTCATCAGTTCAGCC
TCTGATAATATGAACCAAATGATGGCCATGCAAATGGGCGCGGATGATTTTATTGAAAAACCATTCAACTTAAATTTAAC
TATTATGAAAATACAAGCGCTATTAAGAAGGTCTTACGATTTTAAAGTGGAACAAACGGAACTTAACGTCAAAGGATGTC
AGTTAATCACGGAAAAGGCGTTACTCACGTATGAAGGTCAAACCGTTTCACTTACCTTGACGGAACTTCAAATTTTACAA
TTGTTGTTTTTAAATGAAGATCAATTTGTCAGTCGTAATGCGCTGATAGAACAGTGTTGGCAATCTGAAAATTTTATAGA
TGACAATACATTGGCCGTCAATATGTCACGTTTACGCAAAAAATTAAAACAATTAGGATTAACAGAGTTGATTCAAACGA
AGAAAAATGTCGGATACAAAGTGTAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

67.421

100

0.674