Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MUA19_RS00675 Genome accession   NZ_CP094741
Coordinates   148317..148982 (+) Length   221 a.a.
NCBI ID   WP_105986773.1    Uniprot ID   -
Organism   Staphylococcus chromogenes strain IVB6200     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 143317..153982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA19_RS00655 (MUA19_00650) - 143871..145256 (-) 1386 WP_262616887.1 amino acid permease -
  MUA19_RS00660 (MUA19_00655) - 145851..146399 (+) 549 WP_394371351.1 DUF4064 domain-containing protein -
  MUA19_RS00665 (MUA19_00660) - 146501..147664 (+) 1164 WP_262616890.1 M20 family metallopeptidase -
  MUA19_RS00670 (MUA19_00665) - 147750..148187 (-) 438 WP_316959992.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  MUA19_RS00675 (MUA19_00670) braR 148317..148982 (+) 666 WP_105986773.1 response regulator transcription factor Regulator
  MUA19_RS00680 (MUA19_00675) braS 149014..149901 (+) 888 WP_316959997.1 sensor histidine kinase Regulator
  MUA19_RS00685 (MUA19_00680) - 149991..150740 (+) 750 WP_232194821.1 ABC transporter ATP-binding protein -
  MUA19_RS00690 (MUA19_00685) - 150742..152724 (+) 1983 WP_262616892.1 chloride channel protein -
  MUA19_RS00695 (MUA19_00690) - 152769..153395 (-) 627 WP_037576676.1 FMN-dependent NADH-azoreductase -
  MUA19_RS00700 (MUA19_00695) spn 153630..153950 (-) 321 WP_262616894.1 SPIN family peroxidase inhibitor -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25877.02 Da        Isoelectric Point: 5.6940

>NTDB_id=671714 MUA19_RS00675 WP_105986773.1 148317..148982(+) (braR) [Staphylococcus chromogenes strain IVB6200]
MKIMIVEDDFTIANSLVQELRKWNHEAINVQDYIHIKDRFLEMQPHLILLDINLPNFNGFHWCQEIRKDSNVPIIFISSA
SDNMNQMMAMQMGADDFIEKPFNLNLTIMKIQALLRRSYDFKVEQTELNVKGCQLITEKALLTYQGQTVSLTLTELQILQ
LLFLNEDQFVSRNALIEQCWQSENFIDDNTLAVNMSRLRKKLKQLGLTEFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=671714 MUA19_RS00675 WP_105986773.1 148317..148982(+) (braR) [Staphylococcus chromogenes strain IVB6200]
ATGAAGATTATGATTGTTGAAGATGATTTCACGATTGCCAATAGTTTAGTGCAAGAATTACGCAAGTGGAATCATGAAGC
GATAAATGTTCAAGACTACATACATATTAAAGACCGTTTTTTAGAAATGCAGCCTCACTTGATTTTATTAGATATTAACC
TCCCGAATTTCAACGGTTTCCACTGGTGTCAGGAAATACGTAAAGATTCAAACGTCCCTATTATTTTCATCAGTTCAGCC
TCTGATAACATGAACCAAATGATGGCCATGCAAATGGGAGCGGATGATTTTATTGAAAAACCATTCAATTTAAATTTAAC
CATTATGAAAATACAAGCGCTATTAAGAAGGTCTTATGATTTTAAAGTGGAACAAACGGAACTCAACGTCAAAGGATGTC
AGTTGATTACGGAAAAGGCACTACTCACGTACCAAGGTCAAACCGTTTCACTTACCTTGACGGAACTTCAAATTTTACAG
TTGTTGTTTTTAAATGAAGATCAATTTGTCAGTCGTAATGCGCTGATAGAACAGTGTTGGCAATCCGAAAATTTTATAGA
TGACAATACATTGGCCGTCAATATGTCACGTTTACGCAAAAAACTAAAACAATTAGGATTAACAGAGTTTATTCAAACGA
AGAAAAATGTCGGATACAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-106)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

68.778

100

0.688