Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG966_RS23170 Genome accession   NZ_CP109137
Coordinates   5110585..5111709 (-) Length   374 a.a.
NCBI ID   WP_326651705.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01750     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5105585..5116709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG966_RS23145 (OG966_23175) cseB 5106332..5107036 (-) 705 WP_326651700.1 two-component system response regulator CseB -
  OG966_RS23150 (OG966_23180) - 5107049..5107720 (-) 672 WP_326651701.1 hypothetical protein -
  OG966_RS23155 (OG966_23185) - 5107708..5108274 (-) 567 WP_326651702.1 SigE family RNA polymerase sigma factor -
  OG966_RS23160 (OG966_23190) - 5108470..5109384 (-) 915 WP_326651703.1 A/G-specific adenine glycosylase -
  OG966_RS23165 (OG966_23195) - 5109770..5110561 (+) 792 WP_326651704.1 hypothetical protein -
  OG966_RS23170 (OG966_23200) disA 5110585..5111709 (-) 1125 WP_326651705.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG966_RS23175 (OG966_23205) radA/sms 5111754..5113208 (-) 1455 WP_326651706.1 DNA repair protein RadA Machinery gene
  OG966_RS23180 (OG966_23210) - 5113605..5115263 (+) 1659 WP_326651707.1 hypothetical protein -
  OG966_RS23185 (OG966_23215) - 5115313..5116119 (-) 807 WP_326651708.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40238.10 Da        Isoelectric Point: 5.0263

>NTDB_id=671583 OG966_RS23170 WP_326651705.1 5110585..5111709(-) (disA) [Streptomyces sp. NBC_01750]
MAAKDGASAPGKSGGGSGNEALIRAALSAVAPGTALRDGLERILRGNTGGLLVLGMDKTVESMCTGGFVLDVEFTSTRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCAYPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELNELTHAELLELPIVAKALGYTGAPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=671583 OG966_RS23170 WP_326651705.1 5110585..5111709(-) (disA) [Streptomyces sp. NBC_01750]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCGCTGATCCGCGCCGCCCT
GAGCGCGGTCGCTCCCGGCACCGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGCAACACCGGAGGCCTGCTCGTCC
TCGGCATGGACAAAACTGTCGAATCCATGTGTACCGGCGGTTTTGTGCTGGATGTGGAATTCACCTCGACCCGGCTGCGC
GAGCTGTGCAAACTCGACGGCGCGCTCATCCTCGACAAGGACATCAGCAAGATCCACCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCTACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTATCCCGGCAGTGCGCCTACCCGG
TCGTCTCCGTATCGCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGCCGCGTGCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTGGCGGGCACACTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCGCAGCGTCTGGAGATGGTGCGCCGGATCG
CCACCGAAATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGCCGCCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCC
GGAGTGGAGCCGGAGCGGGAGCTGGTCGTCCGTGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
GGCGCTCACCGAGCTGAATGAGCTCACCCACGCCGAGCTGCTCGAACTGCCTATAGTCGCGAAGGCGTTGGGATACACCG
GCGCTCCCGAAACACTCGACTCCGCGGTCTCGCCACGGGGTTACCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGAGCGGCTCGTCGAGCATTTCGGCGGACTGCAGAAGCTTCTCGCGGCCAGCGTCGACGATCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCCCGCAGCGTGCGCGAGGGGCTTTCACGGCTCGCCGAGTCCTCGATCCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436