NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	OG966_RS03550	Genome accession	NZ_CP109137
Coordinates	796408..799050 (-)	Length	880 a.a.
NCBI ID	WP_326647868.1	Uniprot ID	-
Organism	Streptomyces sp. NBC_01750
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 791408..804050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG966_RS03515 (OG966_03525)	ligD	791419..792441 (+)	1023	WP_326647861.1	non-homologous end-joining DNA ligase	-
OG966_RS03520 (OG966_03530)	-	792580..793029 (-)	450	WP_326647862.1	DUF1931 family protein	-
OG966_RS03525 (OG966_03535)	-	793165..793329 (-)	165	WP_326647863.1	hypothetical protein	-
OG966_RS03530 (OG966_03540)	-	793371..793847 (-)	477	WP_326647864.1	phosphate-starvation-inducible PsiE family protein	-
OG966_RS03535 (OG966_03545)	-	793972..795687 (-)	1716	WP_326647865.1	FAD-dependent oxidoreductase	-
OG966_RS03540 (OG966_03550)	-	795687..795950 (-)	264	WP_326647866.1	UBP-type zinc finger domain-containing protein	-
OG966_RS03545 (OG966_03555)	trxA	795953..796402 (-)	450	WP_326647867.1	thioredoxin	-
OG966_RS03550 (OG966_03560)	clpC	796408..799050 (-)	2643	WP_326647868.1	ATP-dependent chaperone ClpB	Regulator
OG966_RS03555 (OG966_03565)	-	799041..799400 (-)	360	WP_326647869.1	chaperone modulator CbpM	-
OG966_RS03560 (OG966_03570)	-	799397..800341 (-)	945	WP_326647870.1	J domain-containing protein	-
OG966_RS03565 (OG966_03575)	-	800348..800920 (-)	573	WP_326647871.1	nucleotide exchange factor GrpE	-
OG966_RS03570 (OG966_03580)	dnaK	800930..802828 (-)	1899	WP_326647872.1	molecular chaperone DnaK	-
OG966_RS03575 (OG966_03585)	-	802889..803380 (-)	492	WP_326647873.1	general stress protein	-

Sequence

Protein

Download Length: 880 a.a. Molecular weight: 98361.51 Da Isoelectric Point: 5.0546

                                >NTDB_id=671542 OG966_RS03550 WP_326647868.1 796408..799050(-) (clpC) [Streptomyces sp. NBC_01750]

MDMNRLTQKSQEALQEAQTVAVRMGQTEVDGEHLLLALIDQEEGLVPRLFEQTGADTGALRTALEAELARKPKVTGPGAS

PGQVFVTQRLAQLLDTAEKEAKRLKDEYVSVEHLVLALAEEGSSTAAGRVLKEHGVTKEAFLNALTQVRGNQRVTSANPE

VAYEALEKYGRDLVAEARDGKLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDR

TVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT

LDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVD

EACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKETDPASKARLEELRKELADLRGEADAKHAQWDAERQAIRRVQEL

RQELEQVRHEAEQAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQGQNRLLREVVTEEEIAEIVAAWTGIPVSRLQ

EGEREKLLRLDEILRERVIGQDEAVKLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEENMVRL

DMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNT

VIIMTSNIGSEHLLDGATAEGEIKPDARARVMGELRGHFRPEFLNRVDDIVLFRPLGEAQIERIVELQFNELRERLADRR

ITVELTDAARQHIAKQGFDPVYGARPLRRYISHEIETMVGRMLLRGEVEDGSTIRVDDQHGELVVTYDQPQQQTQVGKAA

Nucleotide

Download Length: 2643 bp

                                >NTDB_id=671542 OG966_RS03550 WP_326647868.1 796408..799050(-) (clpC) [Streptomyces sp. NBC_01750]

ATGGATATGAACCGCCTCACCCAGAAGTCGCAGGAAGCCCTCCAGGAGGCCCAGACCGTGGCCGTCCGCATGGGCCAGAC

CGAGGTCGACGGAGAGCATCTGCTGCTGGCCCTCATCGACCAGGAGGAGGGGCTGGTACCGCGGCTGTTCGAACAGACGG

GTGCCGACACCGGCGCGCTGCGCACTGCACTCGAGGCCGAGCTGGCCCGTAAGCCGAAGGTCACCGGTCCCGGGGCCTCT

CCCGGGCAGGTGTTCGTCACTCAGCGTCTGGCGCAGCTGCTGGACACGGCCGAGAAGGAGGCGAAGCGGCTCAAGGACGA

GTACGTGTCGGTGGAGCACCTGGTGCTCGCCCTGGCCGAGGAGGGGTCGTCCACGGCCGCGGGGCGGGTGCTGAAGGAGC

ACGGCGTCACCAAGGAGGCGTTCCTGAACGCGCTCACCCAGGTCCGGGGCAACCAGCGGGTCACCTCGGCCAACCCCGAG

GTGGCCTACGAGGCCCTGGAGAAGTACGGCCGCGATCTGGTCGCCGAGGCCCGCGACGGCAAGCTGGACCCGGTCATCGG

CCGGGATGCCGAGATCCGCCGTGTCACTCAGATCCTCAGCCGCAAGTCGAAGAACAACCCGGTGCTCATCGGCGATCCCG

GCGTCGGCAAGACCGCCATCGTCGAGGGTCTCGCCCAGCGCATCGTGCGTGGCGACGTACCCGAAGGACTGCGTGACCGG

ACGGTGTTCGCCCTCGACATGGGCTCCCTGGTCGCCGGTGCCAAGTACCGCGGTGAGTTCGAGGAACGCCTCAAGGCCGT

GCTCAGCGAGGTCAAGGCCGCCCAGGGACGCATCCTGCTCTTCGTCGACGAGCTGCACACCGTCGTCGGCGCGGGCGCCG

CCGAAGGGGCCATGGACGCGGGCAACATGCTCAAGCCGATGCTCGCCCGCGGCGAGCTGCACATGATCGGCGCGACCACC

CTCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTCGAACGCCGCTTCCAGCAGGTGCTGGTCGACGAGCCGAG

CGTGGAGGACACCATCTCCATCCTGCGCGGACTGCGCGAGCGTCTGGAGGTCTTCCACGGCGTGAAGATCCAGGACACCG

CGCTGGTCTCCGCGGCCACCCTCAGCCACCGCTACATCACCGACCGGTTCCTGCCCGACAAGGCCATCGACCTCGTCGAC

GAAGCCTGCGCCCGGCTGCGTACCGAGATCGACTCCATGCCCGCCGAACTCGACGAGATCACCCGCCGCGTCACCCGCCT

GGAGATCGAGGAAGCCGCCCTGTCCAAGGAGACCGACCCCGCCAGCAAAGCCCGCCTGGAGGAACTGCGCAAGGAACTGG

CCGACCTGCGCGGCGAGGCCGACGCCAAACACGCCCAGTGGGACGCCGAACGCCAGGCCATCCGCCGCGTCCAGGAACTG

CGCCAGGAACTGGAGCAGGTCCGCCACGAGGCGGAGCAGGCCGAACGCGCCTACGACCTCAATCGCGCCGCCGAACTCCG

CTACGGCCGCCTCCAGGACCTGGAGCGCCGACTCGCCGCAGAGGAGGAGCAACTGGCCGCCAAACAAGGGCAGAACCGGC

TGCTGCGCGAGGTCGTCACCGAGGAGGAGATCGCCGAGATCGTCGCCGCATGGACCGGCATCCCCGTCTCCCGCCTCCAG

GAGGGCGAACGCGAAAAACTCCTGCGCCTCGACGAGATCCTGCGCGAGCGCGTCATCGGCCAGGACGAGGCCGTCAAGCT

CGTCGCCGACGCCATCATCCGCGCCCGCTCCGGCATCCGCGACCCTCGCCGCCCCATCGGCTCGTTCATCTTCCTCGGCC

CCACCGGCGTCGGGAAGACCGAGCTGGCCAAGACCCTCGCCCGGGCCCTGTTCGACTCCGAGGAGAACATGGTCCGCCTC

GACATGAGCGAGTACCAGGAGCGGCACACCGTCAGCCGGCTCATGGGCGCACCGCCCGGATACGTCGGCTACGAGGAAGG

CGGCCAGCTCACCGAGGCCGTACGCCGCAAGCCGTACTCCGTTGTGCTGTTCGACGAGGTCGAGAAGGCGCACACCGATG

TCTTCAACACCCTGCTGCAGATCCTCGATGACGGCCGCATCACCGATGCTCAGGGCCGCACCGTCGACTTCCGCAACACC

GTGATCATCATGACGTCCAACATCGGCTCCGAGCACCTCCTCGACGGCGCCACCGCCGAAGGGGAGATCAAGCCGGACGC

CCGCGCCCGGGTGATGGGCGAACTGCGCGGGCACTTCCGCCCCGAGTTCCTCAACCGGGTGGACGACATCGTGCTGTTCA

GGCCCCTCGGCGAGGCCCAGATCGAGCGGATCGTGGAGCTCCAGTTCAATGAGTTGCGCGAGCGGCTCGCGGATCGCCGC

ATCACGGTCGAACTCACCGACGCGGCCCGTCAGCACATCGCCAAGCAGGGTTTCGACCCCGTCTACGGAGCCCGGCCACT

GCGCCGCTACATCTCCCACGAGATCGAGACCATGGTCGGCCGGATGCTGCTGCGCGGCGAGGTCGAGGACGGCTCGACGA

TCCGTGTGGACGACCAGCACGGCGAGCTGGTGGTCACCTACGACCAGCCCCAGCAGCAGACCCAGGTCGGAAAGGCCGCG

TGA