Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MUA70_RS01670 Genome accession   NZ_CP094731
Coordinates   368012..368677 (+) Length   221 a.a.
NCBI ID   WP_002475664.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain IVB6208     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 363012..373677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA70_RS01655 (MUA70_01635) - 364369..365913 (+) 1545 WP_070846427.1 NAD(P)H-binding protein -
  MUA70_RS01660 (MUA70_01640) - 366036..367505 (-) 1470 WP_002496676.1 alkaline phosphatase -
  MUA70_RS01665 (MUA70_01645) - 367802..367981 (+) 180 WP_002501358.1 hypothetical protein -
  MUA70_RS01670 (MUA70_01650) braR 368012..368677 (+) 666 WP_002475664.1 response regulator transcription factor Regulator
  MUA70_RS01675 (MUA70_01655) braS 368683..369579 (+) 897 WP_002475631.1 HAMP domain-containing sensor histidine kinase Regulator
  MUA70_RS01680 (MUA70_01660) - 369690..370439 (+) 750 WP_002490451.1 ABC transporter ATP-binding protein -
  MUA70_RS01685 (MUA70_01665) - 370441..372453 (+) 2013 WP_070592539.1 ABC transporter permease -
  MUA70_RS01690 (MUA70_01670) - 372557..373147 (+) 591 WP_020363892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.74 Da        Isoelectric Point: 5.1924

>NTDB_id=671486 MUA70_RS01670 WP_002475664.1 368012..368677(+) (braR) [Staphylococcus epidermidis strain IVB6208]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=671486 MUA70_RS01670 WP_002475664.1 368012..368677(+) (braR) [Staphylococcus epidermidis strain IVB6208]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792