Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MUA58_RS01420 Genome accession   NZ_CP094729
Coordinates   339521..340186 (+) Length   221 a.a.
NCBI ID   WP_002458294.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain IVB6210     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 334521..345186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA58_RS01405 (MUA58_01400) - 335878..337422 (+) 1545 WP_002458297.1 NAD(P)H-binding protein -
  MUA58_RS01410 (MUA58_01405) - 337545..339014 (-) 1470 WP_002458296.1 alkaline phosphatase -
  MUA58_RS01415 (MUA58_01410) - 339311..339490 (+) 180 WP_002458295.1 hypothetical protein -
  MUA58_RS01420 (MUA58_01415) braR 339521..340186 (+) 666 WP_002458294.1 response regulator transcription factor Regulator
  MUA58_RS01425 (MUA58_01420) braS 340192..341088 (+) 897 WP_002458293.1 HAMP domain-containing sensor histidine kinase Regulator
  MUA58_RS01430 (MUA58_01425) - 341199..341948 (+) 750 WP_002458292.1 ABC transporter ATP-binding protein -
  MUA58_RS01435 (MUA58_01430) - 341950..343962 (+) 2013 WP_002458291.1 FtsX-like permease family protein -
  MUA58_RS01440 (MUA58_01435) - 344066..344656 (+) 591 WP_002458290.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25677.78 Da        Isoelectric Point: 5.1924

>NTDB_id=671449 MUA58_RS01420 WP_002458294.1 339521..340186(+) (braR) [Staphylococcus epidermidis strain IVB6210]
MKIFIVEDDFVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=671449 MUA58_RS01420 WP_002458294.1 339521..340186(+) (braR) [Staphylococcus epidermidis strain IVB6210]
ATGAAGATTTTCATTGTAGAAGACGATTTCGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCTATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGAGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792