Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MUA98_RS01500 Genome accession   NZ_CP094728
Coordinates   351199..351864 (+) Length   221 a.a.
NCBI ID   WP_262625888.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain IVB6213     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 346199..356864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA98_RS01485 (MUA98_01460) - 347556..349100 (+) 1545 WP_002456721.1 NAD(P)H-binding protein -
  MUA98_RS01490 (MUA98_01465) - 349223..350692 (-) 1470 WP_002456720.1 alkaline phosphatase -
  MUA98_RS01495 (MUA98_01470) - 350989..351168 (+) 180 WP_002456719.1 hypothetical protein -
  MUA98_RS01500 (MUA98_01475) braR 351199..351864 (+) 666 WP_262625888.1 response regulator transcription factor Regulator
  MUA98_RS01505 (MUA98_01480) braS 351870..352766 (+) 897 WP_002456718.1 HAMP domain-containing sensor histidine kinase Regulator
  MUA98_RS01510 (MUA98_01485) - 352877..353626 (+) 750 WP_002456717.1 ABC transporter ATP-binding protein -
  MUA98_RS01515 (MUA98_01490) - 353628..355640 (+) 2013 WP_002470142.1 ABC transporter permease -
  MUA98_RS01520 (MUA98_01495) - 355744..356334 (+) 591 Protein_299 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25615.64 Da        Isoelectric Point: 4.8946

>NTDB_id=671414 MUA98_RS01500 WP_262625888.1 351199..351864(+) (braR) [Staphylococcus epidermidis strain IVB6213]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIENPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=671414 MUA98_RS01500 WP_262625888.1 351199..351864(+) (braR) [Staphylococcus epidermidis strain IVB6213]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAACCCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGATAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787