Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG909_RS13040 Genome accession   NZ_CP109132
Coordinates   3139360..3140484 (+) Length   374 a.a.
NCBI ID   WP_326698185.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01754     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3134360..3145484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG909_RS13025 (OG909_13025) - 3134959..3135792 (+) 834 WP_326698182.1 hypothetical protein -
  OG909_RS13030 (OG909_13030) - 3135914..3137710 (-) 1797 WP_326698183.1 hypothetical protein -
  OG909_RS13035 (OG909_13035) radA/sms 3137867..3139279 (+) 1413 WP_326698184.1 DNA repair protein RadA Machinery gene
  OG909_RS13040 (OG909_13040) disA 3139360..3140484 (+) 1125 WP_326698185.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG909_RS13045 (OG909_13045) - 3140697..3141515 (-) 819 WP_326698186.1 hypothetical protein -
  OG909_RS13050 (OG909_13050) - 3141797..3142699 (+) 903 WP_326698187.1 A/G-specific adenine glycosylase -
  OG909_RS13055 (OG909_13055) - 3142898..3143482 (+) 585 WP_326698188.1 SigE family RNA polymerase sigma factor -
  OG909_RS13060 (OG909_13060) - 3143470..3144204 (+) 735 WP_326698189.1 hypothetical protein -
  OG909_RS13065 (OG909_13065) cseB 3144215..3144916 (+) 702 WP_326698190.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40180.09 Da        Isoelectric Point: 5.0137

>NTDB_id=671413 OG909_RS13040 WP_326698185.1 3139360..3140484(+) (disA) [Streptomyces sp. NBC_01754]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDAGIPTEETGTRHRTADRVSKACGFPVVSVSQSMHLIALYVHGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALSELDTLTHTELLELPVAARALGYSGSPESLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=671413 OG909_RS13040 WP_326698185.1 3139360..3140484(+) (disA) [Streptomyces sp. NBC_01754]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCCCCCGGGATGGCCCTCCGTGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGGGGGCTGATCGTCC
TCGGCATGGACAAGACGGTGGAGTCCATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCGGCATCCCCACCGAGGAGACGGGCACCCGTCATCGCACGGCCGACCGCGTCTCCAAGGCGTGCGGTTTCCCCG
TGGTCTCGGTCTCCCAGTCGATGCATCTGATCGCGCTGTACGTGCACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTGGCCGGGACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTCGCGCAGCGCCTGGAGATGGTGCGCCTGATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTTCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAACCGGAGCGCGAGCTGGTGGTGCGCGACTACGTCCCCGAACCGACCGCCAAGCGTTCGCGCACGGTGGCGGA
GGCGTTGAGCGAACTCGACACGCTCACCCACACCGAGCTGCTCGAACTCCCGGTGGCGGCCCGGGCGCTGGGATACAGCG
GATCCCCCGAGTCGCTGGACTCGGCGGTGTCGCCGAGGGGTTACCGCCTGCTGGCGAAGGTGCCCCGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCCAGTGTGGACGACCTCCAGGCGGTCGA
CGGGGTCGGCGAGGCCCGCGCCCGCAGCGTGCGCGAAGGGCTCTCGCGCCTGGCGGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433