Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   MUA17_RS01715 Genome accession   NZ_CP094725
Coordinates   397229..398197 (+) Length   322 a.a.
NCBI ID   WP_115926652.1    Uniprot ID   -
Organism   Staphylococcus felis strain IVB6254     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 392229..403197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA17_RS01685 (MUA17_01690) - 392240..393475 (-) 1236 WP_115902744.1 aminoacyltransferase -
  MUA17_RS01690 (MUA17_01695) - 393692..394114 (+) 423 WP_103210069.1 universal stress protein -
  MUA17_RS01695 (MUA17_01700) cidR 394557..395438 (+) 882 WP_103210067.1 cidABC operon transcriptional activator CidR -
  MUA17_RS01700 (MUA17_01705) - 395555..395944 (+) 390 WP_232332032.1 CidA/LrgA family protein -
  MUA17_RS01705 (MUA17_01710) - 395944..396627 (+) 684 WP_103210063.1 LrgB family protein -
  MUA17_RS01710 (MUA17_01715) - 396849..397025 (+) 177 WP_180706687.1 hypothetical protein -
  MUA17_RS01715 (MUA17_01720) ceuB 397229..398197 (+) 969 WP_115926652.1 ABC transporter permease Machinery gene
  MUA17_RS01720 (MUA17_01725) - 398187..399146 (+) 960 WP_394802135.1 iron chelate uptake ABC transporter family permease subunit -
  MUA17_RS01725 (MUA17_01730) - 399143..399961 (+) 819 WP_115890335.1 ABC transporter ATP-binding protein -
  MUA17_RS01730 (MUA17_01735) - 399964..400998 (+) 1035 WP_262632849.1 siderophore ABC transporter substrate-binding protein -
  MUA17_RS01735 (MUA17_01740) - 401115..401555 (-) 441 WP_262632850.1 MarR family winged helix-turn-helix transcriptional regulator -
  MUA17_RS01740 (MUA17_01745) - 401689..402318 (+) 630 WP_115856470.1 nitroreductase family protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35346.70 Da        Isoelectric Point: 9.7035

>NTDB_id=671349 MUA17_RS01715 WP_115926652.1 397229..398197(+) (ceuB) [Staphylococcus felis strain IVB6254]
MRILMNGYVLLVILCILTVCSLFIGVSSVSVADVFRLDDKQLNILFASRIPRTVSILIAGSSLALSGLIMQQMMQNKFVS
PTTAGTMEWAKLGILISLIFFPSQHILLKLIFAVLCSVIGTFLFVQIIQRIQFKDVVFVPLVGIMIGGIVSSFSTFIALQ
TNAVQSIGNWLNGNFAIITSGRYEVLYLSLPLLILTYVYANQFTIAGMGRDFSQSLGLNYQFVMNMGLMIIATITALVVV
TVGTLPFLGLIVPNIVAIFKGDHLKFALPHTAMLGAIFVMISDILGRLIVYPYEINIGLTIGVFGTVIFILMLMKGRHQY
AQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=671349 MUA17_RS01715 WP_115926652.1 397229..398197(+) (ceuB) [Staphylococcus felis strain IVB6254]
ATGCGAATTTTAATGAATGGTTATGTTTTATTGGTCATCCTCTGTATTCTTACTGTTTGTTCCTTATTTATTGGTGTGAG
TAGTGTTTCGGTAGCGGATGTGTTTCGTTTGGATGATAAGCAACTTAATATTTTATTTGCTAGTCGTATTCCTAGAACGG
TAAGTATCCTTATTGCTGGTAGTAGCCTAGCTTTGTCAGGATTAATAATGCAACAGATGATGCAAAATAAATTCGTGAGT
CCGACGACTGCAGGAACGATGGAGTGGGCGAAACTTGGGATATTGATTTCGTTGATTTTTTTTCCATCGCAGCATATTTT
GTTGAAGCTCATCTTTGCGGTTCTCTGTAGTGTGATAGGAACATTTTTATTTGTTCAAATTATTCAACGTATTCAGTTTA
AAGACGTGGTTTTTGTCCCTTTAGTTGGCATTATGATAGGTGGTATTGTTTCTAGTTTTTCAACGTTTATCGCTTTACAA
ACAAATGCTGTACAAAGTATTGGAAACTGGTTAAATGGCAATTTTGCGATTATTACAAGTGGGCGATATGAAGTTTTATA
TCTTAGTTTACCGCTACTCATATTGACATATGTATACGCTAATCAGTTTACAATAGCAGGTATGGGACGTGATTTTAGCC
AAAGTTTAGGTTTGAATTATCAATTTGTTATGAATATGGGATTAATGATTATTGCAACAATTACTGCATTAGTTGTTGTA
ACTGTAGGAACGTTACCTTTTTTAGGTTTGATTGTCCCAAATATAGTAGCTATTTTTAAAGGTGATCACTTAAAGTTTGC
TTTGCCTCACACAGCGATGCTCGGAGCGATTTTTGTAATGATTTCAGATATTTTAGGTCGTTTAATCGTTTATCCATATG
AAATCAATATTGGTCTAACAATTGGTGTATTTGGAACTGTGATTTTCATCTTAATGTTGATGAAAGGGCGTCATCAATAT
GCACAATAA

Domains


Predicted by InterproScan.

(14-315)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

97.205

0.481