Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA48_RS05945 | Genome accession | NZ_CP094719 |
| Coordinates | 1208789..1209763 (+) | Length | 324 a.a. |
| NCBI ID | WP_262603244.1 | Uniprot ID | - |
| Organism | Staphylococcus sp. IVB6238 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1203789..1214763
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA48_RS05910 (MUA48_05880) | rpmG | 1203987..1204136 (+) | 150 | WP_095116787.1 | 50S ribosomal protein L33 | - |
| MUA48_RS05915 (MUA48_05885) | - | 1204585..1205124 (+) | 540 | WP_262603238.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA48_RS05920 (MUA48_05890) | - | 1205142..1206581 (+) | 1440 | WP_262603239.1 | rhomboid family intramembrane serine protease | - |
| MUA48_RS05925 (MUA48_05895) | - | 1206583..1206786 (+) | 204 | WP_262603240.1 | YqgQ family protein | - |
| MUA48_RS05930 (MUA48_05900) | - | 1206783..1207763 (+) | 981 | WP_262603241.1 | ROK family glucokinase | - |
| MUA48_RS05935 (MUA48_05905) | - | 1207770..1208081 (+) | 312 | WP_262603242.1 | MTH1187 family thiamine-binding protein | - |
| MUA48_RS05940 (MUA48_05910) | - | 1208110..1208733 (+) | 624 | WP_262603243.1 | MBL fold metallo-hydrolase | - |
| MUA48_RS05945 (MUA48_05915) | comGA | 1208789..1209763 (+) | 975 | WP_262603244.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA48_RS05950 (MUA48_05920) | comGB | 1209732..1210799 (+) | 1068 | WP_262603245.1 | competence type IV pilus assembly protein ComGB | - |
| MUA48_RS05955 (MUA48_05925) | comGC | 1210810..1211130 (+) | 321 | WP_262603246.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA48_RS05960 (MUA48_05930) | comGD | 1211108..1211554 (+) | 447 | WP_262603247.1 | competence type IV pilus minor pilin ComGD | - |
| MUA48_RS05965 (MUA48_05935) | - | 1211833..1212231 (+) | 399 | WP_262603248.1 | competence type IV pilus minor pilin ComGF | - |
| MUA48_RS05970 (MUA48_05940) | - | 1212397..1212921 (+) | 525 | WP_262603249.1 | shikimate kinase | - |
| MUA48_RS05975 (MUA48_05945) | gcvT | 1213082..1214173 (+) | 1092 | WP_262603250.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36678.28 Da Isoelectric Point: 6.6895
>NTDB_id=671168 MUA48_RS05945 WP_262603244.1 1208789..1209763(+) (comGA) [Staphylococcus sp. IVB6238]
MQFLLDTVIKHAITEGASDIHFIPSNEQVEVNFRIKDRLSCYDTLNSETYQRLLTLLKFQAGLDVSSRHRAQSGRYIYQF
KELYYLRVSTLPLNLGTESCVVRITPQYFQNTSLKDTEDICRLMEKKQGLILFSGPTGAGKSTLMYQMVLYAKQALNLNI
ITIEDPVEQILNGVTQISVNEKADITYSASLKAILRCDPDVILIGEIRDARIAKEVIQASLSGHLVLTTIHANDCQGVLL
RLLEMGIPQQDILQATNLIVNQRLVTTVDQKRELVYETMLHSDIQHFLTHDFQLPGTFTSLSEKLNLLNDKGVIDGATLR
KYQK
MQFLLDTVIKHAITEGASDIHFIPSNEQVEVNFRIKDRLSCYDTLNSETYQRLLTLLKFQAGLDVSSRHRAQSGRYIYQF
KELYYLRVSTLPLNLGTESCVVRITPQYFQNTSLKDTEDICRLMEKKQGLILFSGPTGAGKSTLMYQMVLYAKQALNLNI
ITIEDPVEQILNGVTQISVNEKADITYSASLKAILRCDPDVILIGEIRDARIAKEVIQASLSGHLVLTTIHANDCQGVLL
RLLEMGIPQQDILQATNLIVNQRLVTTVDQKRELVYETMLHSDIQHFLTHDFQLPGTFTSLSEKLNLLNDKGVIDGATLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=671168 MUA48_RS05945 WP_262603244.1 1208789..1209763(+) (comGA) [Staphylococcus sp. IVB6238]
ATGCAATTTCTATTGGATACAGTGATAAAGCACGCGATTACAGAAGGGGCATCAGATATTCATTTTATTCCTTCTAATGA
ACAAGTAGAGGTGAATTTTCGAATTAAAGACCGATTAAGTTGTTACGACACATTAAATTCTGAGACGTATCAACGTTTAC
TGACGCTCCTAAAATTTCAAGCAGGATTAGATGTATCATCTAGGCATCGCGCACAAAGCGGACGCTATATTTATCAATTT
AAAGAACTATACTACTTGCGTGTATCTACATTGCCTTTAAACTTAGGGACTGAAAGTTGTGTTGTGCGCATTACACCACA
ATATTTCCAAAACACATCACTCAAAGATACAGAGGATATTTGTCGCTTGATGGAAAAGAAGCAAGGACTGATCTTATTCA
GTGGGCCCACTGGTGCTGGAAAGAGCACACTTATGTATCAGATGGTACTTTATGCCAAACAAGCACTTAATCTAAATATC
ATCACGATTGAAGATCCGGTCGAACAGATTCTAAATGGCGTCACACAAATATCTGTAAATGAAAAAGCAGATATCACATA
TAGTGCATCATTAAAAGCCATTTTACGTTGTGACCCAGACGTCATACTTATTGGGGAAATACGAGATGCCAGAATAGCCA
AAGAAGTGATACAAGCGAGTTTAAGTGGTCATCTTGTTCTAACAACCATCCATGCAAATGATTGCCAAGGTGTACTGCTC
AGATTATTAGAAATGGGCATTCCACAACAAGATATACTTCAAGCCACCAATTTAATCGTCAATCAACGGCTTGTGACGAC
TGTAGATCAAAAAAGAGAACTTGTATATGAAACAATGTTACATTCAGACATTCAACATTTTTTAACGCATGATTTCCAAC
TTCCTGGAACATTTACAAGCTTGTCAGAAAAACTGAATTTATTAAATGATAAGGGGGTTATTGATGGAGCCACTCTTAGA
AAGTATCAGAAGTAG
ATGCAATTTCTATTGGATACAGTGATAAAGCACGCGATTACAGAAGGGGCATCAGATATTCATTTTATTCCTTCTAATGA
ACAAGTAGAGGTGAATTTTCGAATTAAAGACCGATTAAGTTGTTACGACACATTAAATTCTGAGACGTATCAACGTTTAC
TGACGCTCCTAAAATTTCAAGCAGGATTAGATGTATCATCTAGGCATCGCGCACAAAGCGGACGCTATATTTATCAATTT
AAAGAACTATACTACTTGCGTGTATCTACATTGCCTTTAAACTTAGGGACTGAAAGTTGTGTTGTGCGCATTACACCACA
ATATTTCCAAAACACATCACTCAAAGATACAGAGGATATTTGTCGCTTGATGGAAAAGAAGCAAGGACTGATCTTATTCA
GTGGGCCCACTGGTGCTGGAAAGAGCACACTTATGTATCAGATGGTACTTTATGCCAAACAAGCACTTAATCTAAATATC
ATCACGATTGAAGATCCGGTCGAACAGATTCTAAATGGCGTCACACAAATATCTGTAAATGAAAAAGCAGATATCACATA
TAGTGCATCATTAAAAGCCATTTTACGTTGTGACCCAGACGTCATACTTATTGGGGAAATACGAGATGCCAGAATAGCCA
AAGAAGTGATACAAGCGAGTTTAAGTGGTCATCTTGTTCTAACAACCATCCATGCAAATGATTGCCAAGGTGTACTGCTC
AGATTATTAGAAATGGGCATTCCACAACAAGATATACTTCAAGCCACCAATTTAATCGTCAATCAACGGCTTGTGACGAC
TGTAGATCAAAAAAGAGAACTTGTATATGAAACAATGTTACATTCAGACATTCAACATTTTTTAACGCATGATTTCCAAC
TTCCTGGAACATTTACAAGCTTGTCAGAAAAACTGAATTTATTAAATGATAAGGGGGTTATTGATGGAGCCACTCTTAGA
AAGTATCAGAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |