Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHA08_RS20305 Genome accession   NZ_CP109121
Coordinates   4484063..4485187 (+) Length   374 a.a.
NCBI ID   WP_326604439.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01763     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4479063..4490187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA08_RS20290 (OHA08_20325) - 4479644..4480513 (+) 870 WP_267004539.1 hypothetical protein -
  OHA08_RS20295 (OHA08_20330) - 4480545..4482329 (-) 1785 WP_326814595.1 hypothetical protein -
  OHA08_RS20300 (OHA08_20335) radA/sms 4482570..4483982 (+) 1413 WP_326604438.1 DNA repair protein RadA Machinery gene
  OHA08_RS20305 (OHA08_20340) disA 4484063..4485187 (+) 1125 WP_326604439.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA08_RS20310 (OHA08_20345) - 4485342..4486151 (-) 810 WP_326629356.1 hypothetical protein -
  OHA08_RS20315 (OHA08_20350) - 4487004..4487906 (+) 903 WP_326629355.1 A/G-specific adenine glycosylase -
  OHA08_RS20320 (OHA08_20355) - 4488082..4488732 (+) 651 WP_326629353.1 SigE family RNA polymerase sigma factor -
  OHA08_RS20325 (OHA08_20360) - 4488801..4489412 (+) 612 WP_326814596.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40375.27 Da        Isoelectric Point: 4.8644

>NTDB_id=671073 OHA08_RS20305 WP_326604439.1 4484063..4485187(+) (disA) [Streptomyces sp. NBC_01763]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=671073 OHA08_RS20305 WP_326604439.1 4484063..4485187(+) (disA) [Streptomyces sp. NBC_01763]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTTATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAAGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCGGCTGTCGCACAACGTTTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGTCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCACGACTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGATCTTCAGACGGTGGA
CGGAGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGTTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433