Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA61_RS04130 Genome accession   NZ_CP094715
Coordinates   858351..859067 (-) Length   238 a.a.
NCBI ID   WP_029056065.1    Uniprot ID   -
Organism   Staphylococcus pasteuri strain IVB6198     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 853351..864067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA61_RS04115 (MUA61_04115) - 854770..855720 (+) 951 WP_262552845.1 LacI family DNA-binding transcriptional regulator -
  MUA61_RS04120 (MUA61_04120) - 855840..857324 (+) 1485 WP_262552846.1 sucrose-6-phosphate hydrolase -
  MUA61_RS04125 (MUA61_04125) - 857321..858280 (+) 960 WP_070452076.1 carbohydrate kinase -
  MUA61_RS04130 (MUA61_04130) agrA 858351..859067 (-) 717 WP_029056065.1 quorum-sensing response regulator AgrA Regulator
  MUA61_RS04135 (MUA61_04135) agrC 859080..860369 (-) 1290 WP_029056064.1 quorum-sensing sensor histidine kinase AgrC -
  MUA61_RS04140 (MUA61_04140) agrD 860394..860534 (-) 141 WP_029056063.1 cyclic lactone autoinducer peptide AgrD -
  MUA61_RS04145 (MUA61_04145) - 860518..861102 (-) 585 WP_070452081.1 accessory gene regulator AgrB -
  MUA61_RS04150 (MUA61_04150) - 861419..861496 (+) 78 WP_015364840.1 delta-lysin family phenol-soluble modulin -
  MUA61_RS04155 (MUA61_04155) - 861561..861638 (+) 78 WP_072291871.1 delta-lysin family phenol-soluble modulin -
  MUA61_RS04160 (MUA61_04160) - 862035..862820 (-) 786 WP_124760428.1 carbon-nitrogen family hydrolase -
  MUA61_RS04165 (MUA61_04165) - 862935..863561 (-) 627 WP_017638094.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27914.90 Da        Isoelectric Point: 5.6599

>NTDB_id=671057 MUA61_RS04130 WP_029056065.1 858351..859067(-) (agrA) [Staphylococcus pasteuri strain IVB6198]
MKIFICEDDPKQRENMSSIIKNYIMIEEKPMELALATDDPYEVLEQSKEMNDIGCYFLDIQLEADINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELKTRIIDCLETAHTRLKLLSKESNVETIELKRGSNSVYVQYDDIM
FFESSSKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRRNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=671057 MUA61_RS04130 WP_029056065.1 858351..859067(-) (agrA) [Staphylococcus pasteuri strain IVB6198]
ATGAAAATTTTCATTTGCGAAGATGATCCAAAACAAAGGGAGAATATGAGTTCAATTATTAAAAATTATATTATGATTGA
GGAAAAACCTATGGAGCTTGCTCTCGCAACTGATGATCCTTATGAAGTGCTTGAGCAATCAAAAGAAATGAATGATATCG
GTTGTTATTTCTTAGATATCCAACTCGAAGCAGATATTAATGGTATTAAATTAGGTAGTGAAATTCGCAAACATGACCCT
GTCGGCAATATTATCTTTGTTACAAGTCATAGCGAACTAACATACCTCACCTTTGTATACAAAGTGGCGGCGATGGATTT
CATATTTAAAGATGACCCAGCAGAACTGAAAACACGAATTATTGATTGTTTAGAAACCGCTCACACAAGACTTAAGTTAT
TATCAAAAGAAAGTAATGTTGAAACAATCGAATTAAAACGTGGAAGTAATTCAGTGTATGTACAATATGACGATATTATG
TTTTTCGAATCATCTAGTAAATCACATCGTTTAATCGCCCATTTAGATAATAGACAAATCGAATTTTATGGTAATCTCAA
AGAATTAAGTCAATTAGATGACCGCTTCTTTAGATGCCACAATAGTTTTGTAGTTAATCGAAGAAACATAGAATCAATTG
ATTCAAAAGAACGTATTGTCTATTTCAAAAACAAAGAACATTGTTATGCATCTGTTCGAAATGTTAAAAAAATCTAG

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

93.697

100

0.937