Detailed information NTG0670982

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MUA40_RS11010
• Genome accession: NZ_CP094712
• Coordinates: 2320176..2321543 (-)
• Length: 455 a.a.
• NCBI ID: WP_126496070.1
• Uniprot ID: -
• Organism: Staphylococcus schleiferi strain IVB6183
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2315176..2326543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA40_RS10985 (MUA40_10955)	cysE	2315377..2316006 (-)	630	WP_171839470.1	serine O-acetyltransferase	-
MUA40_RS10990 (MUA40_10960)	gltX	2316393..2317847 (-)	1455	WP_016424287.1	glutamate--tRNA ligase	-
MUA40_RS10995 (MUA40_10965)	ispF	2317924..2318403 (-)	480	WP_016424286.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
MUA40_RS11000 (MUA40_10970)	ispD	2318396..2319094 (-)	699	WP_016424285.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
MUA40_RS11005 (MUA40_10975)	-	2319095..2320156 (-)	1062	WP_262569578.1	PIN/TRAM domain-containing protein	-
MUA40_RS11010 (MUA40_10980)	radA	2320176..2321543 (-)	1368	WP_126496070.1	DNA repair protein RadA	Machinery gene
MUA40_RS11015 (MUA40_10985)	-	2321979..2324438 (-)	2460	WP_262569579.1	ATP-dependent Clp protease ATP-binding subunit	-
MUA40_RS11020 (MUA40_10990)	-	2324456..2325460 (-)	1005	WP_016424281.1	protein arginine kinase	-
MUA40_RS11025 (MUA40_10995)	-	2325450..2325980 (-)	531	WP_016424280.1	UvrB/UvrC motif-containing protein	-
MUA40_RS11030 (MUA40_11000)	-	2325994..2326455 (-)	462	WP_016424279.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50007.54 Da
• Isoelectric Point: 6.9560

>NTDB_id=670982 MUA40_RS11010 WP_126496070.1 2320176..2321543(-) (radA) [Staphylococcus schleiferi strain IVB6183]
MAKKKVIFECTACGYQSPKWMGKCPNCGAWNTMEESIEQKVASPKHGVRSQKTSTSKIQKLNEIKQEQAPRILTNSDEFN
RVLGGGIVEGSLVLIGGDPGIGKSTLLLQMCAALSQSKNVLYITGEESLNQTKLRADRLDEDASQLNVFAETDLEVIHEA
VKKIEPELIVVDSIQTIYHPEISSAPGSVSQVRESTQSLMHIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEG
DEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKSVLNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNN
PRRMATGIDHNRLSLLMAVLEKKEGYLLQQQDAYIKVAGGVKLSEPAVDLSIIIATASSFKDQAVDGLDCFIGEVGLTGE
VRRVSRIEQRVQEAAKLGFKRVILPKTNIGGWQFPQGIEVIGVSTVNEALKYAIK

Nucleotide

• Length: 1368 bp

>NTDB_id=670982 MUA40_RS11010 WP_126496070.1 2320176..2321543(-) (radA) [Staphylococcus schleiferi strain IVB6183]
GTGGCGAAAAAGAAAGTGATATTTGAATGTACAGCTTGTGGTTATCAATCTCCAAAATGGATGGGCAAATGTCCAAATTG
TGGTGCATGGAATACAATGGAAGAATCGATAGAGCAAAAAGTAGCGAGCCCTAAACATGGGGTCAGATCTCAAAAAACGA
GTACTTCCAAAATTCAAAAACTAAATGAAATTAAACAAGAGCAAGCACCGCGTATCCTAACAAATAGTGATGAGTTTAAC
CGTGTACTTGGCGGAGGTATTGTAGAAGGATCGCTCGTTCTCATTGGTGGTGACCCAGGTATTGGGAAATCGACGTTGTT
ATTACAAATGTGTGCAGCATTGTCCCAAAGTAAAAATGTATTATATATTACAGGTGAGGAGTCACTTAATCAAACAAAGT
TAAGAGCAGATCGCCTAGACGAAGATGCGAGTCAATTGAATGTTTTTGCTGAGACAGACTTAGAAGTGATTCATGAAGCA
GTAAAGAAAATTGAACCGGAGCTTATTGTAGTGGACTCAATTCAAACGATTTATCATCCAGAGATTAGTTCGGCTCCAGG
CTCTGTGTCACAAGTTCGTGAAAGTACACAAAGCTTAATGCATATTGCAAAACAAATGAATATTGCTACTTTTATTGTAG
GGCATGTGACAAAAGAAGGCCAAATTGCTGGACCGCGTTTGTTAGAACACATGGTGGATACGGTGCTGTATTTCGAAGGC
GACGAACATCATGCTTATCGTATTTTAAGAGCCGTTAAAAACCGTTTTGGTTCCACGAATGAAATGGGCATATTCGAAAT
GAAACAGTCTGGATTGAAAAGTGTATTGAACCCATCAGAGATGTTTTTAGAAGAGCGTTCTACCAACGTACCTGGCTCAA
CAATCGTTGCGACGATGGAAGGGACACGTCCGCTACTTATTGAAGTTCAAGCGCTCGTTACGCCGACGACATTTAATAAC
CCTCGACGAATGGCTACAGGCATAGATCATAATCGTTTGAGTTTATTAATGGCAGTGTTAGAGAAAAAAGAAGGCTATCT
ATTACAACAACAAGACGCCTATATTAAAGTAGCAGGAGGCGTGAAGTTGTCTGAGCCAGCAGTGGATTTAAGTATTATTA
TCGCAACAGCATCAAGTTTTAAAGACCAAGCTGTCGATGGATTAGATTGCTTTATTGGAGAAGTTGGATTAACAGGTGAA
GTACGACGCGTTTCCCGTATCGAACAACGGGTACAAGAAGCGGCAAAACTCGGTTTTAAACGTGTGATATTACCTAAAAC
AAATATAGGGGGATGGCAATTCCCGCAAGGTATTGAAGTGATTGGTGTTTCTACTGTAAATGAAGCATTAAAATATGCCA
TAAAATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (68-220)

• Subunit ChlI of Mg-chelatase (ChlI) (345-428)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	66.886	100	0.67
radA	Streptococcus pneumoniae Rx1	60.31	99.121	0.598
radA	Streptococcus pneumoniae D39	60.31	99.121	0.598
radA	Streptococcus pneumoniae R6	60.31	99.121	0.598
radA	Streptococcus pneumoniae TIGR4	60.31	99.121	0.598
radA	Streptococcus mitis NCTC 12261	60.31	99.121	0.598
radA	Streptococcus mitis SK321	60.31	99.121	0.598