Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHB04_RS18315 Genome accession   NZ_CP109104
Coordinates   4117133..4118254 (+) Length   373 a.a.
NCBI ID   WP_326688769.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01775     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4112133..4123254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB04_RS18300 (OHB04_18315) - 4112473..4113288 (+) 816 WP_326688767.1 hypothetical protein -
  OHB04_RS18305 (OHB04_18320) - 4113329..4115209 (-) 1881 WP_326809468.1 hypothetical protein -
  OHB04_RS18310 (OHB04_18325) radA/sms 4115419..4116807 (+) 1389 WP_326688768.1 DNA repair protein RadA Machinery gene
  OHB04_RS18315 (OHB04_18330) disA 4117133..4118254 (+) 1122 WP_326688769.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB04_RS18320 (OHB04_18335) - 4118358..4119227 (-) 870 WP_326688770.1 hypothetical protein -
  OHB04_RS18325 (OHB04_18340) - 4119454..4120425 (+) 972 WP_326688771.1 A/G-specific adenine glycosylase -
  OHB04_RS18330 (OHB04_18345) - 4120555..4122447 (-) 1893 WP_326807819.1 MDR family MFS transporter -
  OHB04_RS18335 (OHB04_18350) - 4122562..4123131 (+) 570 WP_326688773.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40065.84 Da        Isoelectric Point: 4.9989

>NTDB_id=670844 OHB04_RS18315 WP_326688769.1 4117133..4118254(+) (disA) [Streptomyces sp. NBC_01775]
MAANDRAAVPGRAEGASGLMRATLSAVAPGTALRDGLERVLRGNTGGLMVLGMDRTVEALCTGGFVLDVDFSATRLRELC
KLDGALILDGDISKIVRAGVQLVPDASIETEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVEGQRRVLEDSAAILS
RANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVE
PERELVVRDYAPQAGGSGRRVRTVPEALSELDRLTHTELLELPTVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGTV
IDRLVDHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=670844 OHB04_RS18315 WP_326688769.1 4117133..4118254(+) (disA) [Streptomyces sp. NBC_01775]
GTGGCAGCCAACGACCGGGCAGCGGTCCCCGGCAGGGCCGAGGGGGCGTCCGGCCTGATGCGCGCGACACTGAGCGCGGT
CGCACCGGGCACAGCCCTGCGCGACGGGCTGGAGCGCGTCCTGCGGGGGAACACCGGCGGCCTCATGGTCCTCGGCATGG
ACAGGACGGTCGAAGCGCTGTGCACCGGCGGCTTCGTCCTCGACGTGGACTTCAGCGCGACCCGGCTGCGCGAGCTGTGC
AAGCTGGACGGCGCGCTCATCCTCGACGGGGACATCTCCAAGATCGTCCGGGCCGGTGTGCAGCTCGTCCCCGACGCCTC
CATCGAGACCGAGGAGACGGGCACCCGGCACCGCACCGCCCAGCGCGTCTCTATCCAGACCGGCTTCCCGGTCGTCTCCG
TCAGCCAGTCCATGCGGCTGATCGCCCTCTACGTCGAGGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCGATCCTCTCC
CGTGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTGCGGCTCGACGAGGTCGCCGGCACGCTCTCCGCGCTGGA
GATCGAGGACCTGGTGACCGTCCGGGACGTCACGGCCGTCGCCCAGCGCCTGGAGATGGTGCGCAGGATCGCCACGGAGA
TCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGACGGCTGCTCTCGCTCCAGCTCGACGAGCTGATCGCCGGGGTGGAG
CCCGAGCGCGAGCTGGTCGTGCGGGACTACGCGCCGCAGGCGGGCGGTTCGGGCCGCCGCGTGCGCACCGTGCCCGAGGC
GCTCAGCGAACTGGACCGGCTCACCCACACCGAGTTGCTCGAACTGCCCACGGTGGCACGGGCACTGGGCTACAGCGGGG
CCCCCGAGACGCTGGATTCCGCCGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGACCGTC
ATCGACCGGCTGGTGGACCACTTCGGCGGGCTTCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGGCGGTGGACGG
CGTCGGCGAGGCCCGTGCCCGCTCGGTCCGCGAGGGCCTCTCGCGGCTGGCCGAGTCCTCGATCCTTGAGCGCTACGTCT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.886

94.37

0.424