Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA41_RS04780 Genome accession   NZ_CP094702
Coordinates   1060791..1061507 (-) Length   238 a.a.
NCBI ID   WP_023015910.1    Uniprot ID   -
Organism   Staphylococcus simulans strain IVB6209     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1055791..1066507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA41_RS04760 (MUA41_04755) - 1056936..1057577 (+) 642 WP_002481727.1 redox-sensing transcriptional repressor Rex -
  MUA41_RS04765 (MUA41_04760) - 1057628..1057852 (-) 225 WP_002481726.1 sulfurtransferase TusA family protein -
  MUA41_RS04770 (MUA41_04765) - 1057908..1058996 (-) 1089 WP_070463416.1 YeeE/YedE family protein -
  MUA41_RS04775 (MUA41_04770) - 1059232..1060716 (+) 1485 WP_262556378.1 glycoside hydrolase family 32 protein -
  MUA41_RS04780 (MUA41_04775) agrA 1060791..1061507 (-) 717 WP_023015910.1 quorum-sensing response regulator AgrA Regulator
  MUA41_RS13220 agrC 1061510..1062811 (-) 1302 WP_394802183.1 quorum-sensing sensor histidine kinase AgrC -
  MUA41_RS04790 (MUA41_04785) agrD 1062857..1062994 (-) 138 WP_002481721.1 cyclic lactone autoinducer peptide AgrD -
  MUA41_RS04795 (MUA41_04790) - 1062994..1063572 (-) 579 WP_262556381.1 accessory gene regulator AgrB -
  MUA41_RS04800 (MUA41_04795) - 1063884..1064048 (+) 165 WP_158257062.1 delta-lysin family phenol-soluble modulin -
  MUA41_RS04805 (MUA41_04800) - 1064353..1065153 (-) 801 WP_105978620.1 carbon-nitrogen family hydrolase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27761.60 Da        Isoelectric Point: 4.7718

>NTDB_id=670781 MUA41_RS04780 WP_023015910.1 1060791..1061507(-) (agrA) [Staphylococcus simulans strain IVB6209]
MKIIICEDDVQQREHIESIIENYIMIEEKPLEVALSTGDPYKVLEFAKATNEICCYFLDIQLDSDINGIKLGSELRNYDS
VGSIIFITSHSELTYLTFVYKVAAMDFIFKDDPSEMKSRIIDCIETALTRLQLLSKESSLETIELKRGSNSVYVNYDDVM
FFESSAKSHRLIAHLDNRQIEFYGNLKDLSQLDDRFFRCHNSYVINRNNIEEVISKEREVYFKNGEHCYISVRNLKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=670781 MUA41_RS04780 WP_023015910.1 1060791..1061507(-) (agrA) [Staphylococcus simulans strain IVB6209]
GTGAAGATTATTATATGCGAAGATGATGTACAACAGCGTGAACACATTGAATCCATCATTGAAAATTATATTATGATTGA
AGAAAAACCTTTAGAAGTGGCGCTCTCAACGGGTGATCCTTATAAGGTATTAGAATTCGCTAAAGCTACAAATGAGATTT
GTTGTTACTTCTTAGATATTCAGTTAGATTCTGATATTAACGGTATTAAGCTTGGCAGCGAACTTAGAAACTATGATTCT
GTCGGCAGTATTATCTTTATTACTAGCCACAGTGAACTCACTTATCTTACTTTCGTTTATAAAGTAGCAGCCATGGACTT
TATTTTTAAAGATGACCCTTCAGAAATGAAATCTCGAATTATTGATTGTATCGAAACTGCATTGACGAGACTACAGTTGC
TTTCAAAAGAATCTAGTCTCGAAACAATTGAGTTAAAACGTGGCAGTAACTCAGTCTATGTTAATTACGATGATGTCATG
TTCTTTGAATCCTCGGCAAAATCACATCGTTTAATTGCGCATTTAGACAATCGTCAAATCGAATTTTATGGCAACTTAAA
AGATTTAAGCCAATTAGATGACCGCTTCTTCCGTTGTCACAATAGTTACGTCATTAATCGTAATAACATCGAAGAAGTAA
TATCTAAAGAACGTGAAGTCTACTTTAAAAATGGTGAACACTGTTATATCTCAGTAAGAAATTTAAAGAAAATCTAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

78.992

100

0.79