Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA31_RS04985 Genome accession   NZ_CP094698
Coordinates   1100980..1102023 (+) Length   347 a.a.
NCBI ID   WP_002481663.1    Uniprot ID   -
Organism   Staphylococcus simulans strain IVB6241     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1095980..1107023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA31_RS04960 (MUA31_04965) - 1096984..1097703 (+) 720 WP_070848237.1 type 1 glutamine amidotransferase -
  MUA31_RS04965 (MUA31_04970) - 1097786..1098772 (-) 987 WP_002481667.1 aromatic acid exporter family protein -
  MUA31_RS04970 (MUA31_04975) map 1098991..1099755 (+) 765 WP_002481666.1 type I methionyl aminopeptidase -
  MUA31_RS04975 (MUA31_04980) - 1099871..1100266 (+) 396 WP_002481665.1 hypothetical protein -
  MUA31_RS04980 (MUA31_04985) liaF 1100282..1100983 (+) 702 WP_002481664.1 cell wall-active antibiotics response protein LiaF -
  MUA31_RS04985 (MUA31_04990) vraS 1100980..1102023 (+) 1044 WP_002481663.1 sensor histidine kinase Regulator
  MUA31_RS04990 (MUA31_04995) vraR 1102013..1102642 (+) 630 WP_002481662.1 response regulator transcription factor Regulator
  MUA31_RS04995 (MUA31_05000) - 1102713..1103291 (-) 579 WP_002481661.1 carbonic anhydrase -
  MUA31_RS05000 (MUA31_05005) - 1103499..1104575 (-) 1077 WP_057510596.1 YihY/virulence factor BrkB family protein -
  MUA31_RS05005 (MUA31_05010) - 1104706..1104996 (-) 291 WP_002481659.1 hypothetical protein -
  MUA31_RS05010 (MUA31_05015) - 1105004..1105468 (-) 465 WP_023015860.1 low molecular weight protein-tyrosine-phosphatase -
  MUA31_RS05015 (MUA31_05020) - 1105692..1105898 (+) 207 WP_262547376.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39897.15 Da        Isoelectric Point: 4.8944

>NTDB_id=670750 MUA31_RS04985 WP_002481663.1 1100980..1102023(+) (vraS) [Staphylococcus simulans strain IVB6241]
MNHYIRAIGSMLILNYSILAIFFFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILMSIIVGSVLAYKVNEQNDWIKT
QIEHSIEGEVVGINDQNIELYQETLDIYHTLVPLNQELHRLRIKTQDLTNETYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESPLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLFNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEENDGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=670750 MUA31_RS04985 WP_002481663.1 1100980..1102023(+) (vraS) [Staphylococcus simulans strain IVB6241]
ATGAACCACTATATCAGAGCCATCGGTTCGATGCTGATATTGAACTATAGTATATTAGCGATTTTCTTTTTTATAGACAA
AGTATTCGTCAACATCATCTACTTTCAAGGAATGTTTTACACGCAGATTTTCGGCATTCCTGTTTTCTTATTTTTAAATA
TTATAGTGATTTTGATGAGTATTATTGTTGGTTCTGTGTTAGCGTATAAAGTGAACGAACAAAATGATTGGATTAAAACA
CAAATCGAACATTCCATTGAAGGGGAAGTTGTCGGTATTAATGATCAAAATATCGAACTCTACCAAGAAACTTTGGATAT
CTATCACACACTTGTGCCATTAAACCAAGAATTACATCGACTACGTATTAAAACACAAGATTTGACCAATGAAACATATA
ATTTAAATGACGTTAAAGTGAAGAAAATTATAGAAGATGAACGCCAGCGTTTAGCTAGAGAATTGCATGATTCAGTTAGT
CAGCAATTATTTGCGGCAAGTATGATGTTATCGGCGATTAAGGAATCACCACTTGAACCGCCGCTTGATCAGCAAATTCC
GACACTAGAAAAGATGGTACAAGATTCGCAACTAGAAATGCGTGCATTGTTATTACATTTAAGACCGCTTGGCTTAAAAG
ATCGCTCACTTGGGGAAGGAATTAAAGATCTTGTTGTGGACTTACAAAAGAAAGTGCCTATGAAAGTAGTTTATGATATT
GAAGACTTTGAGGTACCAAAAGGCATAGAAGATCATTTATTCCGTATCACCCAAGAAGGGATTTCCAATACACTGCGACA
TGCAGAAGGCACAAAATTAACGATAGATTTATTTAATAAAGATGATTATCTGTTATTGCGTATTCAAGATGATGGTAAAG
GCTTTGATGTAGATGAAAAAATGGAGAAAAGCTATGGATTGAAGAATATGCGAGAGCGAGCATTAGAAATTGGGGCAACA
CTGCATATTGTTTCTTTGCCTGGGGCAGGGACAAGAATTGAAGTGAAGGCTCCATTGAATAAGGAGGAAAATGATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

86.167

100

0.862