Detailed information NTG0670677

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: K4205_RS12620
• Genome accession: NZ_CP094684
• Coordinates: 2757253..2758641 (-)
• Length: 462 a.a.
• NCBI ID: WP_002574319.1
• Uniprot ID: A0A6M5G7E6
• Organism: Enterocloster bolteae strain VE303-01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2752253..2763641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4205_RS12620 (K4205_12620)	radA	2757253..2758641 (-)	1389	WP_002574319.1	DNA repair protein RadA	Machinery gene
K4205_RS12625 (K4205_12625)	-	2758730..2759146 (-)	417	WP_002567200.1	hypothetical protein	-
K4205_RS12630 (K4205_12630)	-	2759265..2761874 (-)	2610	WP_024725619.1	ATP-dependent Clp protease ATP-binding subunit	-
K4205_RS12635 (K4205_12635)	-	2761928..2762962 (-)	1035	WP_002574317.1	ATP--guanido phosphotransferase	-
K4205_RS12640 (K4205_12640)	-	2762955..2763572 (-)	618	WP_024725620.1	UvrB/UvrC motif-containing protein	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50006.60 Da
• Isoelectric Point: 5.6461

>NTDB_id=670677 K4205_RS12620 WP_002574319.1 2757253..2758641(-) (radA) [Enterocloster bolteae strain VE303-01]
MAKARTTAFFCKECGYESSKWMGQCPACKAWNSMVEEPVSKPAGSQAGLGRLASGSQKSPVPAARPSLLSEIDIEEQDRI
STGFGELDRVLGDGIVAGSLVLVGGDPGIGKSTLLLQVCRNLAGAGQRVLYISGEESLKQIKMRANRIGPVTGELKFLCE
TSLEHIERAIDAENPQIAVIDSIQTMYREEISSAPGSVSQVRESTGILMQIAKSRGIAIFVVGHVTKEGVVAGPRVLEHM
VDTVLYFEGDRNASYRILRSVKNRFGSTNEIGVFEMQEQGLAEVENPSEYMLDGRPEEASGAVVSCSFEGTRPILLEVQA
LVTETNFGMPRRTAAGTDYNRVNLLMAVLEKRCRYEMSRLDAYVNIAGGMKMNEPALDLAIIMALMSSYKDRPVDPKMLI
FGEVGLSGEVRAVSQASQRVNEAAKLGFTACVLPRVCADKMKPVEGIRLIGVSNVREAIGIM

Nucleotide

• Length: 1389 bp

>NTDB_id=670677 K4205_RS12620 WP_002574319.1 2757253..2758641(-) (radA) [Enterocloster bolteae strain VE303-01]
ATGGCAAAAGCGAGAACCACCGCATTTTTCTGTAAGGAATGCGGATATGAATCATCCAAATGGATGGGGCAGTGTCCTGC
CTGCAAGGCCTGGAATTCCATGGTGGAGGAACCGGTGTCAAAGCCGGCAGGCAGTCAGGCCGGGTTAGGGCGCCTGGCTT
CGGGAAGCCAGAAGTCCCCGGTTCCGGCAGCCAGACCATCCCTGCTGTCAGAGATTGACATAGAGGAGCAGGACCGTATA
TCCACTGGCTTTGGGGAACTGGACCGGGTGCTGGGAGACGGAATCGTGGCAGGCTCCCTGGTGCTGGTGGGCGGAGACCC
GGGTATCGGAAAATCCACCCTTCTTCTTCAGGTATGCCGGAATCTGGCGGGCGCAGGCCAGCGGGTCCTGTACATATCAG
GGGAGGAATCCTTAAAACAGATTAAGATGAGGGCAAACCGCATCGGTCCTGTAACCGGAGAGCTGAAATTCCTGTGTGAG
ACAAGCCTGGAGCATATTGAGAGGGCCATTGACGCTGAGAATCCTCAGATTGCAGTTATTGATTCCATACAGACCATGTA
CAGGGAGGAGATATCCTCTGCTCCCGGAAGCGTCAGCCAGGTAAGGGAGTCCACGGGAATCCTGATGCAGATAGCAAAGA
GCCGGGGAATCGCCATTTTTGTGGTGGGGCATGTGACAAAGGAAGGCGTGGTGGCAGGCCCCAGGGTACTGGAACATATG
GTGGATACGGTACTCTATTTTGAGGGAGACAGGAATGCGTCCTACCGCATTCTGCGCAGTGTGAAAAACCGGTTTGGATC
TACCAATGAGATAGGTGTATTTGAGATGCAGGAACAGGGGCTGGCAGAGGTGGAGAATCCCTCTGAATACATGCTGGACG
GCCGTCCGGAGGAAGCCTCCGGCGCAGTGGTATCCTGTTCCTTTGAGGGTACCAGGCCCATTCTTTTAGAGGTACAGGCC
CTGGTGACGGAGACGAATTTCGGTATGCCCAGGCGGACGGCGGCCGGTACGGATTACAACCGTGTGAACCTGCTGATGGC
AGTTCTGGAGAAGCGCTGCCGCTATGAGATGTCGCGGCTGGATGCCTATGTGAATATAGCGGGAGGCATGAAGATGAACG
AGCCCGCCCTGGATCTGGCCATTATCATGGCCCTTATGTCCAGCTACAAAGACCGGCCCGTGGATCCGAAAATGCTCATA
TTCGGGGAGGTGGGCCTGTCAGGGGAGGTCAGGGCCGTATCCCAGGCCAGCCAGCGTGTGAATGAGGCTGCCAAGCTGGG
CTTTACAGCCTGTGTGCTGCCGAGAGTATGCGCGGATAAGATGAAGCCTGTGGAGGGCATACGTTTGATTGGGGTGTCCA
ATGTGCGGGAGGCCATTGGAATTATGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (86-229)

• Subunit ChlI of Mg-chelatase (ChlI) (351-435)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

3D structure

• AlphaFold DB: A0A6M5G7E6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	56.739	99.567	0.565
radA	Streptococcus mitis NCTC 12261	51.634	99.351	0.513
radA	Streptococcus mitis SK321	51.634	99.351	0.513
radA	Streptococcus pneumoniae Rx1	51.416	99.351	0.511
radA	Streptococcus pneumoniae D39	51.416	99.351	0.511
radA	Streptococcus pneumoniae R6	51.416	99.351	0.511
radA	Streptococcus pneumoniae TIGR4	51.416	99.351	0.511