Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OIE65_RS19440 Genome accession   NZ_CP109075
Coordinates   4307871..4308995 (+) Length   374 a.a.
NCBI ID   WP_326604439.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01800     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4302871..4313995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE65_RS19425 (OIE65_19480) - 4303462..4304331 (+) 870 WP_267004539.1 hypothetical protein -
  OIE65_RS19430 (OIE65_19485) - 4304363..4306138 (-) 1776 WP_326604437.1 hypothetical protein -
  OIE65_RS19435 (OIE65_19490) radA/sms 4306378..4307790 (+) 1413 WP_326604438.1 DNA repair protein RadA Machinery gene
  OIE65_RS19440 (OIE65_19495) disA 4307871..4308995 (+) 1125 WP_326604439.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE65_RS19445 (OIE65_19500) - 4309150..4309959 (-) 810 WP_326604440.1 hypothetical protein -
  OIE65_RS19450 (OIE65_19505) - 4310814..4311716 (+) 903 WP_326604441.1 A/G-specific adenine glycosylase -
  OIE65_RS19455 (OIE65_19510) - 4311893..4312540 (+) 648 WP_326604442.1 SigE family RNA polymerase sigma factor -
  OIE65_RS19460 (OIE65_19515) - 4312609..4313220 (+) 612 WP_326604443.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40375.27 Da        Isoelectric Point: 4.8644

>NTDB_id=670540 OIE65_RS19440 WP_326604439.1 4307871..4308995(+) (disA) [Streptomyces sp. NBC_01800]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=670540 OIE65_RS19440 WP_326604439.1 4307871..4308995(+) (disA) [Streptomyces sp. NBC_01800]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTCATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATTCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCATCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCGGCTGTCGCACAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACCGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGACTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433