Detailed information NTG0670484

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ISX51_RS04270
• Genome accession: NZ_CP094659
• Coordinates: 862735..866124 (-)
• Length: 1129 a.a.
• NCBI ID: WP_122053495.1
• Uniprot ID: -
• Organism: Vibrio lentus strain ED252
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 857735..871124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ISX51_RS04255 (ISX51_04255)	-	858159..859184 (-)	1026	WP_065102991.1	ABC transporter permease	-
ISX51_RS04260 (ISX51_04260)	-	859187..860173 (-)	987	WP_281053378.1	ABC transporter permease	-
ISX51_RS04265 (ISX51_04265)	-	860343..862025 (-)	1683	WP_017106921.1	ABC transporter substrate-binding protein	-
ISX51_RS04270 (ISX51_04270)	chiS	862735..866124 (-)	3390	WP_122053495.1	response regulator	Regulator
ISX51_RS04275 (ISX51_04275)	rsmC	866341..867363 (-)	1023	WP_281053379.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ISX51_RS04280 (ISX51_04280)	-	867740..868825 (-)	1086	WP_017106924.1	AI-2E family transporter	-
ISX51_RS04285 (ISX51_04285)	hemL	869146..870453 (-)	1308	WP_017106926.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ISX51_RS04290 (ISX51_04290)	erpA	870750..871091 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127277.98 Da
• Isoelectric Point: 5.3726

>NTDB_id=670484 ISX51_RS04270 WP_122053495.1 862735..866124(-) (chiS) [Vibrio lentus strain ED252]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSVFKRDDYGTNLVTGKYKDSNLGLTFQRLAKDVREKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTLDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYNESGSYSHFQAPDLIDNTQQENSAISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIREDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGINSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVEAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRFETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=670484 ISX51_RS04270 WP_122053495.1 862735..866124(-) (chiS) [Vibrio lentus strain ED252]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCGTTTCTCGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATCTTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCACACCTTGTTT
CGGTCCGTGATACTAAGCAGCAGCAAATCGTCGATTACCTACAGGCGCAAGAGTCGCAAGTGATGGGCTTCGTTCGCTCT
GAGCTAGCCAATGCCAGTGGTGGACGTTTCTACGGTTTAATCAATGCCTTTCAACGACTCGGCTTAGATATTGATGAAGC
GCGCAGCAATGCTCAACAGCGCTACATTCAAGGCTCAGGCGATCAAATCAAAACATCTATCCTACCTGAATCGAGTAGTT
TCATTGGAAGTGAACGCTATCGCTTGCTGCATAAGCGCTACCATAACTCATACCAAGAACTGCTTAAGCGTTCAGATTTC
GATGACATTCTACTGGTCGACATTAATGGTAACGTCGCTTATTCCGTGTTTAAGCGTGATGATTACGGTACCAACTTAGT
CACAGGTAAATACAAAGATTCAAATCTAGGCCTTACCTTTCAACGACTAGCAAAAGACGTAAGAGAAAAACGTAAATCTA
ATGAAGACTATACGCCAGTTATCGTTTCAGACTTTAAAGACGAGAACGGTAAACAGACTGCATGGTTAGGTGCGCCAATT
GTTCAACAAGGCTATCTGCACAGCTATGCCATGTTTCGACTGCCTATTAACGGCATTACCAAGCTTATTGCGGATCTAAA
CAAAAGCTCAAATATTCAAACACTTCTTGTTGGTAGTGACCACTTACCTCGCAGCCTAGCTCACTCTCAAGAATCGATTA
ACCTGAGCTTAGATGTTGTCGACAAAGCTCTGGCAGGCGAAACAGCAGTAGGCACATTTGATAACACTCTCGATCAGGCG
ATCATCGCTGCTTACACCCCGATTGAATTGAAGTACGCAACTTGGGCTCTCGTCGTTGAGCTTCCAGAAAAAGAGGCGTT
TGCTCGCATTCATCAATTAGAAAAGATCTTCGTGATTGTGATGCTGACAGCGATCATTCTCGTAGTCGTTGCATCGCACT
ACTTATCGAACTTCATCACCTCGCCATTGTTAAAGCTCACTTGGGCCGCCGAGAAGGTCTCCGCGGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGTAAAGACGAAATAGGTCGCCTAGCAGTCAGCTTTGAAAGGATGCAGCGTTCTATTCGTGA
AAAAATGCTGCTGATTAAAAGTCAAAATGATGAGTTAGAGGACAACCTCAAAACGATTCAAAAACAAAATGAAGAGTTGC
AGCTTGCCAATAAACTGAAAGATGAATTCTTGGCAACGACTTCGCATGAACTCAGAACACCACTACATGGCATGGTTGGT
ATTGCAGAGGCATTAATATCTGGTGCGAACGGCCCTATTCCTGCCAACCAGAAGTACCAGTTGGATATCATCATCAATAG
TGGTCAGAGATTGGCAACCTTGGTTGATGACCTGCTCGATTACCACAAGATGCGTTATGGCAGTTTAGATATTAAGAAGT
CGGCCGTTGATTTGTCCGCGGCCACCAGCTTAGTGCTTGAGCTATCTCATCACCTGCTAGGCAATAAACCGATCCGTATT
ATCAACCAAGTCCCAAGTGACTTAGGTTTAGTCTCATCTGATCCACAACGACTTGAACAAGTGATGTATAACTTGGTCGG
CAATGCTATTAAGTACACATCCGAAGGTAAAATTGTTATCTCTGCGAGCGTTATCGACGACAACATTCGAGTACAAGTTG
TCGATACCGGCCAAGGTATCCCTGCAGAATACCTAGAACATATCTTTGAACCACTGATTCAAGCAGGACAAGATTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTGTCCATTAGCCGCCAGCTGATTGAGCTAATGGGTGGCTCACTGTACGTAAG
TAGCCAACCTATGCTTGGAACAACCTTCAGCTTTACATTACCTTTAGCTACTCAAGAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCGCCTGATTTAATTGATAACACTCAGCAAGAAAATAGCGCTATCAGTGAAGACCCT
AATGGCCCACTGTTAGTCATTGCTGATGATGAGCCGGTAAACCTACGCGTGCTAGACAGCTTCTTGAAATTGGAAGGTTA
TCGAGTGCGCACCGCATGTGACGGCCCAGAAACCATCGAGTTGATTGAGAAAGAGAAACCAGAACTGCTTCTACTCGACA
TCATGATGCCAGGTATGAGCGGCTATCAGGTGTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCTATCATC
ATGCTCACAGCTCTTAATCAAGCAGAAGACCGTGTTCGTGGCTTTGAAGCAGGAGCCAACGATTACTTATCCAAGCCGTT
TAACAAACAGGAACTGGCAGCTCGAATCACAGCGCACTTATCCGCAAGTAAAGCTGAGCAGAGACGCCTTGAGAATGACC
AGCTGCAACTGGAGCTCAAACACCGGGCTATGGTTGAAGCGAACTTACTAGAAACTCAAGGACGCTTGCTAGAACAATTA
GAGTCAGCACCAGAAGCCATCATCTGTATTAGAGAAGACCAACGTATTCGCTTTGCCAACGAAGCTGCTGCCAAGCTGTT
TAGGCGCGGGCAAGAGCAACTTAAGCGTTCAATGGCCGATGAAATCATTGCACCTAAATACCTTAAGGTGGAACAAGCAC
ACTATTGTGGTGACATCGATATCTATATTGATGACACACGTCAGCGCATACCAAGTGATATTCTTAAACTACCTGAAGGA
TCAGGGCTCGATACCATGTATATCTTCAATGTTGGTGGTGGCATTAACTCAAACCGTATCAATAACCTTGAAACGGCGGT
TGAGGCGCTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAACTGCAACAACTGAAAGAACTCGGTGGAGAATTCACTC
GCCTTGCTGATAAGGCAACCGGTGAAGGTAAAAACAAACAAGAGCTAATGCGCGAAGTGTTAGTTGAGGCGATGACCAAT
GCGATCATTTATTGGGAGTCAGTCACTGGTGAAACAAAGTTTGCTTTCGCAGAGAAGAGTGGCTTGTGGCGTGTTTATTT
AGACCGAAGTACGCTGCAAACTCGCACCTTAGATAAATACCTACGCTTTGAAACCTTACCTAAAACGCCTCGCTGGCGAA
CGGTATTGAGCTCTATCGAATTCATACTTGAGCATTGTAAAGAACAAACACCAGAAAGAACTCATATTGAGATGCTAAGG
GATAAACTACAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-922)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.764