Detailed information NTG0670471

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ISX51_RS02730
• Genome accession: NZ_CP094659
• Coordinates: 552753..553757 (+)
• Length: 334 a.a.
• NCBI ID: WP_017104632.1
• Uniprot ID: A0A1B9PSY1
• Organism: Vibrio lentus strain ED252
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 547753..558757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ISX51_RS02715 (ISX51_02715)	-	548137..549426 (-)	1290	WP_017104634.1	malic enzyme-like NAD(P)-binding protein	-
ISX51_RS02720 (ISX51_02720)	rpmE	549761..549979 (-)	219	WP_017055855.1	50S ribosomal protein L31	-
ISX51_RS02725 (ISX51_02725)	priA	550311..552512 (+)	2202	WP_281053321.1	primosomal protein N'	-
ISX51_RS02730 (ISX51_02730)	cytR	552753..553757 (+)	1005	WP_017104632.1	DNA-binding transcriptional regulator CytR	Regulator
ISX51_RS02735 (ISX51_02735)	-	553880..554419 (+)	540	WP_281053322.1	SPOR domain-containing protein	-
ISX51_RS02740 (ISX51_02740)	hslV	554644..555192 (+)	549	WP_017104630.1	ATP-dependent protease subunit HslV	-
ISX51_RS02745 (ISX51_02745)	hslU	555251..556591 (+)	1341	WP_017104629.1	HslU--HslV peptidase ATPase subunit	-
ISX51_RS02750 (ISX51_02750)	-	556747..557664 (+)	918	WP_017104628.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ISX51_RS02755 (ISX51_02755)	rraA	557738..558256 (+)	519	WP_065104140.1	ribonuclease E activity regulator RraA	-
ISX51_RS02760 (ISX51_02760)	zapB	558404..558646 (-)	243	WP_017104626.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36539.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=670471 ISX51_RS02730 WP_017104632.1 552753..553757(+) (cytR) [Vibrio lentus strain ED252]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPTTATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=670471 ISX51_RS02730 WP_017104632.1 552753..553757(+) (cytR) [Vibrio lentus strain ED252]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACCGCAACGGTATCACGTGCATTGATGAACCCTGAGAA
AGTCTCAGTTTCGACTCGAAAACGAGTAGAGACAGCAGTACTTGAAGCTGGATACTCACCCAATACATTAGCTCGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATTGTTCCTGATATCTGTGACCCTTATTTCGCCGAGATCATCCGTGGT
ATCGAAGATGCTGCAGTAGAAAATGATTACCTAGTCCTGCTTGGCGACAGTGGTCAGCAGAAGAAGCGCGAATCATCATT
TGTAAACTTGGTATTCACCAAACAAGCTGACGGCATGCTGCTATTAGGCACCGACCATCCATTTGATGTCAGTAAGCCTG
AACAAAAGAACCTACCGCCTATGGTAATGGCGTGTGAATTTGCACCCGAGCTTGAATTGCCAACGGTACATATCGACAAC
CTGACCTCTGCATTTGAAGCCGTGAACTACCTAGCTCAATTAGGTCATAAGCGCATCGCGCAAATCTCTGGGCCAACCAC
AGCAACCCTGTGTAAGTTCCGCCAACAAGGTTACCAACAAGCACTGCGCCGCGCTGGAGTATCAATGAACCCAGCTTACA
GCACAGTGGGCGACTTCACCTTTGAAGCTGGCGCGCAAGCAGTTCGTCAATTATTGGCTCTTCCAGAGCAACCAACTGCG
ATTTTCTGTCACAACGATGCGATGGCCATTGGTGCGATTCAAGAAGCAAAGAAGCTAGGTTTACGTGTTCCTCAAGACCT
ATCGATTGTTGGCTTCGATGACATCCAGTTCGCTCAATACTGCGATCCACCGCTAACGACGATTTCTCAACCTCGTTACG
AAATTGGACGCCAAGCGATGCTGATGATGCTTGATCTACTGAAAGGTAATGATGTTCAAGCAGGTTCACGTCTACTTGAA
GCCAAACTCGTGGTTCGTGGCAGTACGGCACCACCTCGGATTTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

3D structure

• AlphaFold DB: A0A1B9PSY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.988	99.701	0.877