Detailed information NTG0670428

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MMY79_RS10800
• Genome accession: NZ_CP094657
• Coordinates: 2319750..2320565 (-)
• Length: 271 a.a.
• NCBI ID: WP_252608365.1
• Uniprot ID: -
• Organism: Acinetobacter sp. XS-4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2314750..2325565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMY79_RS10770 (MMY79_10765)	-	2315065..2315505 (-)	441	WP_252608352.1	SRPBCC family protein	-
MMY79_RS10775 (MMY79_10770)	tadA	2315575..2316078 (-)	504	WP_252608354.1	tRNA adenosine(34) deaminase TadA	-
MMY79_RS10780 (MMY79_10775)	-	2316083..2317207 (-)	1125	WP_252608356.1	enoyl-CoA hydratase/isomerase family protein	-
MMY79_RS10785 (MMY79_10780)	ung	2317204..2317917 (-)	714	WP_252608359.1	uracil-DNA glycosylase	-
MMY79_RS10790 (MMY79_10785)	-	2317967..2318563 (-)	597	WP_252608361.1	6-carboxytetrahydropterin synthase	-
MMY79_RS10795 (MMY79_10790)	gspK	2318791..2319750 (-)	960	WP_252608363.1	type II secretion system minor pseudopilin GspK	-
MMY79_RS10800 (MMY79_10795)	xcpW	2319750..2320565 (-)	816	WP_252608365.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MMY79_RS10805 (MMY79_10800)	xcpV	2320565..2320945 (-)	381	WP_004792732.1	type II secretion system minor pseudopilin GspI	Machinery gene
MMY79_RS10810 (MMY79_10805)	-	2320935..2321489 (-)	555	WP_252608367.1	type II secretion system protein	-
MMY79_RS10815 (MMY79_10810)	-	2321499..2322107 (-)	609	WP_016138305.1	TetR/AcrR family transcriptional regulator	-
MMY79_RS10820 (MMY79_10815)	-	2322144..2322917 (-)	774	WP_252608369.1	TatD family hydrolase	-
MMY79_RS10825 (MMY79_10820)	-	2322935..2323276 (-)	342	WP_009387057.1	PilZ domain-containing protein	-
MMY79_RS10830 (MMY79_10825)	-	2323287..2324267 (-)	981	WP_252608371.1	DNA polymerase III subunit delta'	-
MMY79_RS10835 (MMY79_10830)	kdsB	2324281..2325042 (-)	762	WP_252608373.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30864.30 Da
• Isoelectric Point: 10.0345

>NTDB_id=670428 MMY79_RS10800 WP_252608365.1 2319750..2320565(-) (xcpW) [Acinetobacter sp. XS-4]
MIKNKYLRSRSPASHLAARSEQMMRGYSEQSSSSCAQTKRGFNDSHIRNTVSRLTARSSSARLTPASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALELDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKG
IKIQLTVAGVSYEWIYSLNQGDLSLSKQGVQ

Nucleotide

• Length: 816 bp

>NTDB_id=670428 MMY79_RS10800 WP_252608365.1 2319750..2320565(-) (xcpW) [Acinetobacter sp. XS-4]
ATGATAAAAAATAAATATCTTCGTTCAAGAAGTCCAGCTTCTCATCTTGCTGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCGTGGCTTTAATGACTCTCACATTCGAAACACAGTTTCTCGTC
TTACGGCACGATCGAGCAGTGCTCGATTAACTCCTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATT
TTTGCTGTTCTATCTTTGTTGGGTTGGAAGATTTTTGATTATTTATTAAAAGTCCGTGATCGTAATGCACAACACGAAGT
ACAGTTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGAGATACATTGCAAATTATACCTTTATCGGCTAATCAAG
GCGGGCAATTACGTCCAGCCTTAGAGCTTGATAACCAAGTTCTTCGCTTTAGTAAGGCTGGTGTTACGGATCCCTTAAAG
CAAGGATTATCACCTTTTGAGCGTATTGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAA
TTTGAATACTTCAAATAGAGAGCAGCCATTATCAAGTACGCTGTTGAGCCAAGTTGAGCAATTTCAAATTATGGTACTCA
CGCCACAAGAAGTGACAAAGTGGCCAGAAATTAATATTGACCCCACAAAACCTGAAGAATTTAGAAAGCTGCCGAAAGGA
ATAAAAATACAACTCACAGTTGCCGGTGTAAGTTATGAGTGGATTTATAGTTTAAATCAAGGTGATTTATCGCTCTCCAA
GCAAGGAGTGCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (67-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	90.179	82.657	0.745