Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MMY79_RS03355 Genome accession   NZ_CP094657
Coordinates   685215..689720 (+) Length   1501 a.a.
NCBI ID   WP_252612011.1    Uniprot ID   -
Organism   Acinetobacter sp. XS-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 680215..694720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMY79_RS03330 (MMY79_03330) - 680656..681291 (-) 636 WP_252612007.1 hypothetical protein -
  MMY79_RS03335 (MMY79_03335) pilG 681576..681959 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  MMY79_RS03340 (MMY79_03340) - 681983..682345 (+) 363 WP_016137139.1 response regulator -
  MMY79_RS03345 (MMY79_03345) - 682405..682941 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  MMY79_RS03350 (MMY79_03350) - 682985..685066 (+) 2082 WP_252612009.1 methyl-accepting chemotaxis protein -
  MMY79_RS03355 (MMY79_03355) chpA 685215..689720 (+) 4506 WP_252612011.1 hybrid sensor histidine kinase/response regulator Regulator
  MMY79_RS03360 (MMY79_03360) - 689720..690187 (+) 468 WP_252612013.1 hypothetical protein -
  MMY79_RS03365 (MMY79_03365) dapE 690221..691357 (-) 1137 WP_252612015.1 succinyl-diaminopimelate desuccinylase -
  MMY79_RS03370 (MMY79_03370) - 691483..691626 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  MMY79_RS03375 (MMY79_03375) - 691749..692630 (-) 882 WP_252612017.1 DUF1853 family protein -
  MMY79_RS03380 (MMY79_03380) - 692734..693093 (+) 360 WP_252612019.1 YbaN family protein -
  MMY79_RS03385 (MMY79_03385) elsL 693312..693815 (+) 504 WP_252612022.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171432.57 Da        Isoelectric Point: 4.3938

>NTDB_id=670424 MMY79_RS03355 WP_252612011.1 685215..689720(+) (chpA) [Acinetobacter sp. XS-4]
MKEILKTLTEAMMLPEDSYSQQDDEFLDIFVEEIEEIFVELQSLIHEWMQSRNVATLTDIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRIINESLTLTPNIQQYVQLVFKFYFFKLVDDFKSKKEHTVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETETGLEVNDLEPVSDNLTLETTIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNSLDLLAAHCSNEQLDSNLKQFNQVWDAYMEQHG
EHSSPLMPPHGLVSQLLQLDVSELLDAELDFEKGICSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHHNVLEELKLYTQHIPSLNSESLDTDQDVVESLFSIDVEQ
TSHESSVSIESVLTDHVAMSQSVHLDRQFMSSEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWINDQENFAALNNLMR
YLHTLKGGANMIQANYIGLIAHELESIYERLIQRQLITSTALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKSAA
KVYNSLGSTVKETQAESETDAIPELIFEVLQQEAIDNTGLNLDELTSNFEQIVESNIRLVEHTELQVFDAEGYTDSIQDQ
DIDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEKFALYHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFGTEPVMSFVQGDGAEPPPMLGAWE
QTQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEH
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNINRQGTDVVVTF
KDDGQGIDIEKVRQKALLSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKTNNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETVYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDAFFTKREEELA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=670424 MMY79_RS03355 WP_252612011.1 685215..689720(+) (chpA) [Acinetobacter sp. XS-4]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGACGAATTTCT
TGATATTTTTGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTTGATTCATGAATGGATGCAATCTAGAAATG
TTGCTACGCTGACTGACATCCGTCGCCATTTTCATACCTTGAAAGGTTCAGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGATCATCAATGAGAGTCTCACATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATACAGTAGATTTTA
GACCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCT
GATACTCTCACTGCGGAAACTGAGACTGGTTTAGAGGTGAATGATTTAGAACCGGTGTCAGATAATTTAACTCTAGAAAC
CACTATAGAAAGTGAACATAACCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAGCACTTAGCGACTATCG
ATCAGTTCTTAGAACAAGAAATACATCAGCACGAAAGTTATAATGCGCTCATCCGTGCGTTACATACATTGCGCGGTAGC
TCGGCAATGGCTCAAGTAGAAGCAATTTTTGATGCTAGTACGAAGGTTGAGCATTTATTCAAAATCTTATTACAAGAAGA
ACTTTCTTCTCATTCAGAAGAAATTTTACTACTTCGTGATTACCGTCAGTTTATTCGAAATAGTTTAGATCTATTAGCTG
CACATTGCTCTAATGAACAATTAGACTCTAACCTGAAGCAATTCAATCAGGTTTGGGATGCTTATATGGAGCAGCATGGG
GAGCATTCAAGCCCACTCATGCCTCCACATGGTTTGGTATCTCAGCTGTTACAGCTTGATGTTTCAGAATTACTTGATGC
AGAGTTGGATTTTGAGAAAGGAATTTGTTCAGAGTTTCCTCACTATCTTGAACGTTTGAGTGAACAAGCTGATTTGCTAC
TGCAACATACTCAGTCTCAGGCCATGGTTGGTTTATATGAATATACGAACCAGCTGAAAGATAGCTATGACGTATTGCTC
GATCGCCCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAATTATTTGA
TGCATTAGCTGCGGGTCAACGAGTTAGTATTATTGAGCAACACCACAATGTTTTGGAAGAGCTAAAACTATATACCCAAC
ATATTCCAAGCCTTAATTCGGAATCATTAGACACTGATCAGGACGTTGTTGAGTCGTTATTTAGTATTGATGTAGAACAA
ACATCACATGAATCTTCGGTTTCTATCGAAAGTGTATTAACTGATCATGTAGCAATGAGTCAGAGTGTGCATTTAGATCG
CCAGTTCATGTCTAGTGAGCACGTAAACCGTTATTTCGATCCAGAGCTGTTAGATATTTTTCTTGAAGAAGCTGATGAGT
TGCTTGAAGGAATGGATACAGATCTTAATATTTGGATTAATGATCAAGAGAACTTCGCTGCTCTTAATAATCTGATGCGT
TATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATCGCACATGAATTAGAAAGTAT
TTATGAGCGCTTAATTCAAAGACAGTTAATTACTTCAACTGCTCTCATTGATTTTATCCGTCTGGTCCAAGATGATTTGG
CTGATCGTCTACAAATAGTACGTGAACAGCACCTAGATTACGCTGCTTCTCATACTATTCAAGCGCTTAAGAGTGCAGCC
AAGGTCTATAATTCACTTGGATCTACTGTTAAAGAGACGCAAGCTGAGTCTGAAACAGATGCAATACCGGAATTAATTTT
TGAAGTATTACAACAAGAAGCTATAGACAATACTGGCTTAAATCTCGATGAGTTAACTTCTAATTTTGAGCAGATTGTTG
AGTCTAATATTAGGCTTGTTGAACACACAGAATTACAAGTTTTTGATGCAGAAGGCTATACAGACAGCATCCAAGATCAG
GATATTGATTCTGTTGTCGAACAGACATTTATGGAGGAAGCGGCTGAGCTCTTAGAGATGGCTGATCACCTATTAAAGCA
GTGGTTTGAGCAGCGTACTAATCGTAGTATCTTGCTTCAGCTACAAAGAGCAGTGCACAGCTTGAAAGGTGGTTCCCGTA
TGCTGGGACTAGAAACCGTACAAGCGATTGCTTATCAACTTGAAAATGCTTTTGAAAAATTTGCGCTTTATCATTTTAGC
TCAAATATTTATGACAACTTGCTAGAGAGTGCGATTGTCTGGCTAAAAGAGGCAATTTTTAAGCAAAATTATCAACATTT
CGATGGTTTACAACAAAGTTTAGAAAATATTCAATTTATTGAAACCGCAATACAAATTCCAAGTAAGTTGACTAGAACTG
ATCTATTTGGCACTGAACCTGTCATGAGCTTCGTGCAAGGTGATGGGGCAGAACCACCGCCAATGTTGGGAGCATGGGAG
CAAACGCAGCATCTTGAACAAAATAATGAGATGATTCGTGTTTCAGCAGATTTAATCGAGAAAATGATTGATTTGTCTGG
TGAAAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACGCTAGTGGAAATGGAATTAGCCA
TTCAACGACTTGCAGACCAGTTACGTCGAATGGAAGGCGAATTAGAAAGCCAGATTATTGCAAAACACGGTATTGAGCAT
TCTCGTTATACAGAATTTGATCCTCTAGAGATGGACCAATATTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATC
TGCATCGGATTTAGTGGATTTCAAAAATACATTATCAGAAAAAATCAGAGACACCGAAAGTTTGCTGGTACAGCAATCAC
GTATTCAAGCCGAAATTCAAGAAGGACTAATGCGAACGCGATTAGTACCATTCTCTCGATTGCTACCTCGTTTACAACGA
ATTGTGAGACAGACTTCTACGGCATTGGATCGACCAGCAGAGCTTTTTGTGAATAATACCGAAGGTGAGCTAGACCGGAC
AATGCTAGAGCGTTTGGTTACACCACTTGAGCACATGCTTCGAAATGCAATTGACCATGGTCTAGAAGATCGTGCACAAC
GTGAACAAGCGCAAAAACCAGAAACTGGACGTATTGAACTGAATATTAATCGTCAAGGTACGGATGTTGTTGTTACCTTT
AAAGATGATGGCCAAGGTATTGATATCGAGAAGGTCCGTCAAAAGGCTCTCTTGTCTGGTTTGATTAATCCTGAACAAGT
ATTAGAACATCAAGATATTCTACAACTGATTTTCCATCCAGGGTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGCC
GTGGTGTCGGGCTAGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGCCATGTGAGTGTCGATTCTGTTTATGGGCAA
GGAACGATCTTTACCATACGTGTTCCAACCACAGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCAGATCAACAATT
TGCAATTCCGTTGGCTCAAATTGATCGAATTGTTCGAGTTTCCCCAACATCATTAGAACAGTATTTTGGAAGCGCACAAG
AATTCTTTGAATTTGAAAATAAACGTTATCCATTACGCTACTTATCTGAGTTTGTTGGTAATCAACCGATTCCACGTTTA
AGTGGGATGATGTATTCGCTACCAGTATTAATGATTAAGACGAATAATGGACAAACTATTGCATTATTGGTTGATCAGCT
TATTGGTTCACGAGCGCAGATTGTAGTTAAGCCAATCGGGCAGCAGTTTTCTAGTATTGGTGCGATTGCAGGCGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACATAAG
TCGCTCAATGAGACTGTCTATAGACAACGCGAGTCTGACGAACGCCGTCTCATTATGATTGTAGATGACTCTGTTACAGT
CCGTAAGGTGACGACTCGTTTACTCGAACGCCAAGGCTATGACGTAGTCACTGCTAAAGATGGTATTGATGCAATTGAGC
AGTTGGAAAATATTAAACCAGATCTGATGTTGCTTGATATCGAAATGCCGCGAATGGATGGTTTTGAGGTACTTAACCTC
GTACGACATCATGATCTGCATCAAGATATGCCAGTCATTATGATTACATCAAGAACTGGTGAAAAACACCGTGAACGAGC
ATTTGCTTTAGGGGTCAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCTTTTTTCA
CGAAACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.098

100

0.794