Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MP622_RS01405 Genome accession   NZ_CP094643
Coordinates   312273..316760 (+) Length   1495 a.a.
NCBI ID   WP_243792151.1    Uniprot ID   -
Organism   Acinetobacter sp. PK01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 307273..321760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP622_RS01380 (MP622_01380) - 307759..308400 (-) 642 WP_044738272.1 hypothetical protein -
  MP622_RS01385 (MP622_01385) pilG 308684..309067 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  MP622_RS01390 (MP622_01390) - 309088..309387 (+) 300 Protein_271 response regulator -
  MP622_RS01395 (MP622_01395) - 309460..309996 (+) 537 WP_016167068.1 chemotaxis protein CheW -
  MP622_RS01400 (MP622_01400) - 310044..312116 (+) 2073 WP_016167067.1 methyl-accepting chemotaxis protein -
  MP622_RS01405 (MP622_01405) chpA 312273..316760 (+) 4488 WP_243792151.1 Hpt domain-containing protein Regulator
  MP622_RS01410 (MP622_01410) - 316765..317229 (+) 465 WP_016167065.1 hypothetical protein -
  MP622_RS01415 (MP622_01415) dapE 317294..318427 (-) 1134 WP_044738274.1 succinyl-diaminopimelate desuccinylase -
  MP622_RS01420 (MP622_01420) - 318544..318684 (-) 141 WP_016167063.1 entericidin A/B family lipoprotein -
  MP622_RS01425 (MP622_01425) - 318800..319678 (-) 879 WP_243792153.1 DUF1853 family protein -
  MP622_RS01430 (MP622_01430) - 319775..320149 (+) 375 WP_016167061.1 YbaN family protein -
  MP622_RS01435 (MP622_01435) elsL 320191..320697 (+) 507 WP_016167060.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1495 a.a.        Molecular weight: 168238.00 Da        Isoelectric Point: 4.3919

>NTDB_id=670308 MP622_RS01405 WP_243792151.1 312273..316760(+) (chpA) [Acinetobacter sp. PK01]
MKEILKNLVDTTTLPEDSYLDQDAEILEIFVEEIEEIFEELDTIFEQWLANPSDQDTLTIIRRHFHTLKGSGRMVGAKSA
GEVAWAVEDTLNRVIFGSVPLELKIQKFAETVYRVFQFKLYPQFKAVKPIEIDLRPLVLLGQQLQQGQSIEPALEELLSL
ADQLRSPDDLTGLELNSSQAEIALVEEAVVAESSDLQEVTTSIFIEEAEEHLATIDRFLKQDTDEVLDYNGLIRALHTLR
GSSSMAHIQQIFDASSKVENLFKTLLQEEIVSTSNETALLIQYAEFVRDYLHILRQGKVENLNQIDQTFNQAWENYGFNQ
EEFESSANPQGLVSKLIELDIDLLLDAELEFEKRIKNEFPIYVEQLSQKANLLAEHTNNRASQGIHDFIQVLDKCYQALL
AKPTLLNIDYAYELFAQAHQEFIYLFDTLAAGQRISLSAPAEQVLQNLTAFVQQDLEIFDSIEENPSAEMTSELEAELMI
ESGHQTAAVDFATLSKRLHSDVKLVDADEANRQFDEDLLDIFLEEADELLMGIDQDVHTWSSDQSNTAALNNLMRYLHTL
KGGANMIQATHIGLIAHELETIYERIINQQIQVSPALIQIVRLVQDNIADRIQTIREEKVDYPAPEAIDILNNIHALVAG
AVVSTDTEVVTEQKLSAVEHVAVYEAATNESPVVQPVHAEVSSFEEESETQDWVEPVPQPNIVEPSIQDVESLAFDESVR
SIVEETFFEEAAEIFDTMEKLLQHWFEQRSDRSLLLQLQRAAHSLKGGARMVEIEPVGAIAYRLESAFEQFAVHHFNSNV
YDPLLKTTITWLRHAIFDHDYSNFDSLKAGLEAIEYTDVTVQLPTRSSSDYSPITAPSFEFIQGDGAEPPAMMGEWESFG
ANDQSNEMIRISADLIEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSEGGRY
ADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDTEGLLLQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVR
QTASTLNRPAELIVNNTEGELDRTILERLVTPLEHMLRNAIDHGIEDPAQRQLANKPEVGKIELNISRQGTDVMVEFHDD
GKGIDVNRIKEKAISLGLMKEDQLLEKEEILQLIFHPGFSTAQQVTQISGRGVGLDVVQSSIKALGGHVTVDSTLGKGTS
FSIRVPTTVAVSDALMVKSGDQQFAIPLAQIERIIRIAPTTLETYFNSKEDYFKIDNQSYKLRYLSEFVSNQPLPRLSNI
AHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFAAIGAIAGATILGDGQVCLILDGQNIARQVQTTQRVKHGH
DQRDSYRYSNTRRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLIRH
HEVHKQLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLNNIESLLTVKQG

Nucleotide


Download         Length: 4488 bp        

>NTDB_id=670308 MP622_RS01405 WP_243792151.1 312273..316760(+) (chpA) [Acinetobacter sp. PK01]
ATGAAAGAAATATTAAAAAATTTAGTCGATACGACAACGCTTCCAGAAGATAGTTATCTTGACCAAGATGCTGAAATTCT
AGAGATCTTTGTAGAAGAAATTGAAGAAATTTTTGAAGAATTAGATACCATTTTTGAACAGTGGTTAGCAAATCCTTCTG
ATCAGGATACTTTAACGATCATTCGACGCCATTTTCATACATTGAAAGGCTCGGGGCGAATGGTGGGGGCAAAGTCTGCT
GGTGAGGTGGCTTGGGCTGTCGAAGATACTTTAAATCGTGTTATTTTCGGTTCTGTACCTTTAGAGCTTAAGATTCAGAA
ATTTGCTGAAACGGTTTATCGCGTTTTTCAATTTAAGCTTTATCCTCAGTTCAAAGCGGTCAAACCTATAGAAATTGATT
TAAGACCTCTGGTGCTATTGGGGCAGCAGCTACAACAAGGTCAATCAATTGAACCTGCACTTGAAGAATTGTTATCTTTA
GCAGATCAACTCAGATCTCCAGATGATTTGACTGGACTGGAATTAAATTCTTCTCAAGCAGAAATTGCATTGGTGGAAGA
AGCAGTGGTTGCTGAATCAAGCGATCTACAAGAAGTGACGACATCCATTTTCATTGAAGAAGCTGAAGAACATCTTGCAA
CGATTGACCGCTTCTTGAAACAAGATACTGACGAAGTGCTTGATTATAATGGACTGATTCGTGCCTTGCATACTTTGCGT
GGTAGTTCGTCTATGGCGCATATCCAGCAAATTTTTGATGCCAGTTCAAAAGTTGAAAATTTATTTAAGACGCTTTTACA
AGAAGAAATCGTTTCAACTTCAAATGAGACAGCATTACTTATTCAATATGCTGAATTTGTGCGTGACTATTTACATATTT
TACGTCAGGGTAAAGTTGAAAATTTAAATCAAATTGATCAAACATTTAATCAGGCATGGGAAAATTACGGTTTTAATCAA
GAAGAATTTGAATCTAGTGCAAATCCACAAGGCTTGGTATCGAAATTAATAGAATTAGACATTGATCTGTTATTGGATGC
GGAGCTAGAGTTTGAAAAACGCATTAAAAATGAATTTCCTATTTATGTAGAGCAATTAAGTCAAAAAGCGAATTTACTCG
CGGAGCATACCAATAACCGTGCTTCACAGGGGATTCATGATTTTATTCAGGTTTTAGACAAGTGTTACCAAGCTCTTTTA
GCTAAACCAACATTACTCAACATTGACTATGCCTATGAGCTATTCGCTCAGGCGCATCAAGAATTTATTTATCTATTTGA
TACGTTGGCTGCTGGGCAGCGCATAAGTTTATCTGCACCAGCAGAACAAGTGCTTCAAAATTTAACTGCATTCGTACAGC
AAGATCTGGAAATTTTTGATTCAATTGAAGAAAATCCTTCTGCAGAAATGACTTCTGAGCTTGAAGCAGAGTTAATGATC
GAGTCTGGTCATCAGACAGCAGCCGTTGACTTTGCGACTTTGTCAAAACGCTTGCACAGTGATGTGAAATTGGTTGATGC
AGATGAAGCTAATCGACAATTTGACGAAGATCTGTTGGATATCTTCCTCGAGGAAGCTGATGAGCTGCTCATGGGGATTG
ATCAGGATGTACATACATGGAGCAGTGATCAGTCTAATACTGCAGCATTAAATAATTTAATGCGTTATTTGCACACCTTG
AAGGGTGGTGCAAACATGATTCAAGCGACGCATATTGGTTTAATTGCACATGAATTAGAAACCATTTATGAACGTATTAT
CAATCAGCAAATTCAGGTATCACCTGCGCTGATTCAGATTGTTCGTCTGGTTCAGGACAACATTGCTGATCGTATTCAAA
CGATTCGAGAAGAAAAGGTTGATTATCCTGCTCCTGAAGCAATTGATATTTTAAATAATATTCATGCTTTGGTTGCTGGT
GCTGTGGTATCTACAGACACCGAAGTGGTTACAGAACAAAAACTATCTGCTGTTGAACATGTGGCTGTATATGAAGCCGC
GACCAATGAGTCTCCAGTTGTACAGCCTGTACATGCAGAAGTTAGTTCATTTGAAGAAGAATCCGAAACTCAAGATTGGG
TTGAACCCGTACCACAACCGAACATTGTTGAACCATCAATTCAAGATGTTGAATCTTTAGCATTTGATGAGAGTGTGCGT
TCAATTGTTGAAGAAACATTCTTCGAAGAAGCTGCAGAAATTTTCGATACGATGGAAAAACTGTTGCAGCATTGGTTCGA
GCAACGTAGTGACCGTAGTTTATTACTTCAATTGCAACGTGCAGCGCACAGCCTTAAAGGTGGTGCACGCATGGTTGAAA
TTGAGCCTGTAGGGGCGATTGCATATCGTTTAGAAAGTGCTTTCGAACAGTTCGCTGTACATCACTTCAATTCAAATGTT
TATGATCCGCTGCTCAAAACCACGATTACATGGTTAAGACATGCTATTTTTGATCATGATTATAGTAATTTTGACAGTTT
AAAAGCAGGCTTGGAAGCGATTGAATATACAGATGTCACTGTTCAATTACCAACGCGAAGCAGCTCAGATTACTCGCCAA
TAACTGCACCAAGTTTTGAATTTATTCAAGGGGATGGAGCAGAGCCACCAGCAATGATGGGTGAGTGGGAAAGTTTTGGA
GCCAATGATCAATCGAATGAAATGATCCGAATTTCAGCCGATTTGATTGAGAAGATGATTGATTTATCAGGCGAAAATTC
GATTAACCGTTCACGTATCGAGATGGATCTTGGTCAATTAGGCAATACATTGAATGAAATGGAATTGGCGATTAAGCGTC
TTGCTGACCAGTTACGTCGAATGGAAGGGGAATTAGAGTCGCAAATTATTGCCAAACATGGCAGTGAAGGTGGTCGATAC
GCCGACTTTGACCCATTGGAAATGGACCAATATTCATCATTAAATCAGTTGTCTAAATCATTGGCGGAATCTGCTTCGGA
CTTGGTCGACTTCAAGAGTACTTTGGCTGAAAAAATTCGCGATACAGAGGGTTTGTTATTACAGCAATCTCGTATTCAGG
CCGAAATTCAAGAAGGCTTAATGCGAACCCGCTTGGTTCCATTCTCACGCTTATTGCCTCGTTTGCAACGTATTGTGCGT
CAGACAGCTTCAACCTTAAACAGACCTGCTGAGTTAATTGTAAATAATACTGAAGGAGAGTTGGATCGTACTATTCTTGA
GCGGTTAGTCACGCCACTTGAGCATATGTTACGAAATGCCATCGACCACGGTATTGAAGATCCCGCGCAGCGTCAGTTGG
CAAATAAACCTGAAGTTGGGAAAATTGAACTCAATATTAGCCGTCAAGGTACGGATGTTATGGTTGAATTCCATGACGAT
GGTAAAGGGATTGACGTAAATCGAATTAAAGAAAAAGCCATTTCTTTAGGTTTGATGAAAGAAGATCAATTACTTGAAAA
AGAAGAAATTCTGCAGTTGATTTTCCATCCTGGTTTCAGTACTGCACAGCAAGTAACTCAAATTTCTGGGCGAGGTGTTG
GTCTGGATGTCGTACAAAGCTCGATTAAGGCGTTGGGTGGTCATGTCACTGTAGATTCAACCCTTGGAAAAGGAACAAGT
TTTAGTATCCGCGTTCCAACGACTGTAGCAGTAAGTGATGCCTTAATGGTGAAATCTGGGGATCAGCAATTCGCAATTCC
TTTGGCACAAATTGAGCGTATCATTCGAATTGCACCAACGACTTTGGAAACTTACTTTAATAGTAAAGAAGATTATTTCA
AAATTGATAACCAAAGCTATAAGTTACGTTATCTTTCTGAATTTGTTTCCAATCAGCCTTTACCGCGTTTAAGCAATATT
GCTCATTCGTTACCTGTATTGTTAATTAAGGGTAATAGTGGTCAAACGATTGCCTTATTGGTTGATCAATTGATTGGTTC
ACGTGCGCAAATTGTCGTGAAACCAATTGGCCAGCAATTTGCTGCAATTGGTGCGATAGCAGGTGCAACGATTCTAGGTG
ATGGACAAGTGTGTTTGATTTTGGATGGACAAAATATTGCCCGTCAAGTGCAAACCACACAACGTGTGAAACATGGCCAT
GATCAACGTGATTCTTATCGTTATAGCAATACACGTCGTTTAATCATGATTGTCGATGACTCGGTTACAGTACGTAAAGT
TACTTCACGTCTATTAGAGCGCCAAGGTTATGATGTCGTCACTGCGAAAGATGGTGTGGATGCCATGGAGCAGTTAGAAA
ATGTCAAACCTGATTTAATGCTGTTAGATATTGAAATGCCACGTATGGACGGATTTGAAGTAACTAACTTAATTCGTCAC
CACGAAGTTCATAAGCAACTCCCAATTATCATGATTACATCACGTACGGGTGAAAAGCATCGTGAACGAGCATTTAGTTT
GGGTGTAACTCATTATATGGGTAAACCATTCCAAGAGGCTGAATTGTTGAATAACATAGAAAGTCTTTTGACTGTGAAAC
AGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.31

100

0.62