Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MTX16_RS20330 Genome accession   NZ_CP094624
Coordinates   3957487..3957663 (+) Length   58 a.a.
NCBI ID   WP_113304355.1    Uniprot ID   A0A9X8NXR4
Organism   Bacillus thuringiensis strain LX43     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3952487..3962663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTX16_RS20310 clpC 3952818..3955418 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  MTX16_RS20315 - 3955457..3955639 (-) 183 WP_001211116.1 YjzD family protein -
  MTX16_RS20320 - 3955796..3956530 (+) 735 WP_000028712.1 hydrolase -
  MTX16_RS20325 - 3956560..3957432 (+) 873 WP_002164601.1 NAD(P)-dependent oxidoreductase -
  MTX16_RS20330 comZ 3957487..3957663 (+) 177 WP_113304355.1 ComZ family protein Regulator
  MTX16_RS20335 fabH 3958062..3958994 (+) 933 WP_243820914.1 beta-ketoacyl-ACP synthase III -
  MTX16_RS20340 fabF 3959026..3960264 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  MTX16_RS20345 - 3960371..3961159 (+) 789 WP_000513279.1 DUF2268 domain-containing putative Zn-dependent protease -
  MTX16_RS20350 - 3961303..3962049 (+) 747 WP_050252206.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6604.79 Da        Isoelectric Point: 4.4797

>NTDB_id=670292 MTX16_RS20330 WP_113304355.1 3957487..3957663(+) (comZ) [Bacillus thuringiensis strain LX43]
MNEKSMQFLQIAMKHLPEAKAILDDNGIVLDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=670292 MTX16_RS20330 WP_113304355.1 3957487..3957663(+) (comZ) [Bacillus thuringiensis strain LX43]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCGAAGGCAATTTTAGATGATAATGG
AATTGTACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586