Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MTX16_RS07055 Genome accession   NZ_CP094624
Coordinates   1417248..1417706 (+) Length   152 a.a.
NCBI ID   WP_000804870.1    Uniprot ID   A0A9W5P1U9
Organism   Bacillus thuringiensis strain LX43     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1412248..1422706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTX16_RS07040 - 1412917..1413153 (+) 237 WP_000283738.1 hypothetical protein -
  MTX16_RS07045 - 1413315..1415423 (-) 2109 WP_061457668.1 polyphosphate kinase -
  MTX16_RS07050 ppx 1415532..1417106 (-) 1575 WP_004407438.1 exopolyphosphatase -
  MTX16_RS07055 kre 1417248..1417706 (+) 459 WP_000804870.1 YkyB family protein Regulator
  MTX16_RS07060 - 1417738..1418400 (-) 663 WP_000922498.1 YkyA family protein -
  MTX16_RS07065 - 1419015..1419668 (-) 654 WP_000680820.1 diguanylate cyclase -
  MTX16_RS07070 - 1419832..1420065 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  MTX16_RS07075 - 1420097..1420597 (-) 501 WP_000708120.1 hypothetical protein -
  MTX16_RS07080 - 1421010..1422551 (+) 1542 WP_000449912.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=670257 MTX16_RS07055 WP_000804870.1 1417248..1417706(+) (kre) [Bacillus thuringiensis strain LX43]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTTLERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=670257 MTX16_RS07055 WP_000804870.1 1417248..1417706(+) (kre) [Bacillus thuringiensis strain LX43]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAACTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487