Detailed information    

insolico Bioinformatically predicted

Overview


Name   priA   Type   Machinery gene
Locus tag   MTO68_RS21120 Genome accession   NZ_CP094620
Coordinates   4455137..4457362 (+) Length   741 a.a.
NCBI ID   WP_034617817.1    Uniprot ID   A0AAX3PLU7
Organism   Acinetobacter sp. NyZ410     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 4450137..4462362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS21095 (MTO68_21095) - 4451635..4451973 (-) 339 WP_105713855.1 tRNA-binding protein -
  MTO68_RS21100 (MTO68_21100) - 4452323..4452586 (+) 264 WP_034617824.1 DUF2798 domain-containing protein -
  MTO68_RS21105 (MTO68_21105) - 4452669..4453004 (-) 336 WP_004725552.1 hypothetical protein -
  MTO68_RS21110 (MTO68_21110) gspG 4453286..4453723 (-) 438 WP_004816754.1 type II secretion system major pseudopilin GspG -
  MTO68_RS21115 (MTO68_21115) gspF 4453763..4454968 (-) 1206 WP_096735249.1 type II secretion system inner membrane protein GspF -
  MTO68_RS21120 (MTO68_21120) priA 4455137..4457362 (+) 2226 WP_034617817.1 primosomal protein N' Machinery gene
  MTO68_RS21125 (MTO68_21125) - 4457499..4457999 (-) 501 WP_244014228.1 hypothetical protein -
  MTO68_RS21130 (MTO68_21130) - 4458116..4458547 (-) 432 WP_244014230.1 DUF4279 domain-containing protein -
  MTO68_RS21135 (MTO68_21135) - 4458537..4458683 (-) 147 WP_244014231.1 hypothetical protein -
  MTO68_RS21140 (MTO68_21140) - 4458965..4459207 (-) 243 WP_244014233.1 hypothetical protein -
  MTO68_RS21145 (MTO68_21145) - 4459259..4459582 (-) 324 WP_244014235.1 hypothetical protein -
  MTO68_RS21150 (MTO68_21150) - 4459740..4460129 (-) 390 WP_244014236.1 hypothetical protein -
  MTO68_RS21155 (MTO68_21155) - 4460532..4460741 (-) 210 WP_244014238.1 hypothetical protein -
  MTO68_RS21160 (MTO68_21160) - 4460801..4461154 (-) 354 WP_244014240.1 hypothetical protein -
  MTO68_RS21165 (MTO68_21165) - 4461607..4461978 (-) 372 WP_244014241.1 hypothetical protein -

Sequence


Protein


Download         Length: 741 a.a.        Molecular weight: 84288.66 Da        Isoelectric Point: 8.8802

>NTDB_id=670242 MTO68_RS21120 WP_034617817.1 4455137..4457362(+) (priA) [Acinetobacter sp. NyZ410]
MSNTLATPQTIYRIQVAVPVYLNDCFDYQVTAEQYAQAEVGARVAVSFGRQNLIGVIVKKVPIDEPVDSHFKLKAITELL
DEQAILDSKVLSLLTWSSQYYQFPIGEVIQTALPTLLRQGKPYNLLARIWKLLDLHAEDKVKRSEKQQEAYKILKLHPKG
TQENILNLSGVETATLKVLEKKDIVRCDLEPQNVTPEPVQLAQMPLTPNDDQKKAIQAILKAQKKYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDTKRLQAWQHAQTGKASIILGTRSAIYTPL
PHLGLIILDEEHDLSFKQQEGFRYHARDVAMYRAHLENCPIILGSATPSIDSYYLARQEKLTRIELNQRAGAAIMPKMHL
IDLKVAKKQHGLSDVLIAEIKKRLEKKEQVLIFLNRRGYAPVLICESCGWQANCPNCDAHFTLHLKPYQHLHCHHCGTIN
RMPDACPQCNQQQLKPIGMGTAKVEETLNELFPHFPVLRVDRDSTSRVGSWQKIYDQIQKSEPTILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRATERTAQLIIQVAGRAGRGEMKGEVYLQTLRPDHPLLNTLIHNDYRTFAKQTLKDRQAALL
PPFRYTALIRCDSKHQEENLKFLTEMTQLLRQTAEENLIDIWGPIPAPMERKAGRYQAHVVLLSQDRAKMHFYIRQWWQQ
LLHSKPSTMKVTIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=670242 MTO68_RS21120 WP_034617817.1 4455137..4457362(+) (priA) [Acinetobacter sp. NyZ410]
ATGTCGAATACCCTTGCTACGCCACAGACGATTTATCGTATTCAAGTTGCTGTTCCAGTCTATTTGAATGACTGCTTTGA
TTACCAAGTCACCGCTGAACAATATGCGCAAGCTGAAGTCGGTGCGCGTGTTGCAGTGTCTTTTGGCAGACAAAATCTGA
TTGGTGTTATTGTTAAGAAAGTACCGATTGATGAACCTGTGGATTCTCATTTTAAACTCAAAGCCATTACTGAACTGTTA
GATGAACAGGCCATTCTAGACAGTAAAGTTTTAAGTTTATTGACATGGTCATCACAATATTATCAATTTCCTATCGGTGA
AGTGATTCAAACGGCGTTACCTACCTTATTACGCCAAGGTAAACCTTATAATTTATTGGCACGTATCTGGAAACTTTTAG
ACTTACATGCCGAAGACAAAGTTAAGCGTTCTGAAAAACAACAAGAAGCCTATAAAATTTTAAAGCTACACCCGAAAGGG
ACACAGGAAAATATTCTTAATTTAAGTGGTGTTGAAACAGCCACGCTCAAAGTCCTTGAGAAAAAAGACATTGTTCGTTG
TGATTTGGAACCACAGAATGTCACGCCAGAACCTGTGCAATTGGCACAGATGCCCCTCACGCCAAATGACGATCAGAAGA
AAGCCATTCAAGCGATTTTAAAAGCGCAAAAAAAATATCAAGCGTTTCTACTGGATGGTTTAACTGGGAGTGGTAAAACC
GAAGTTTATTTGCAAGTGATGCATGAAGTACTTAAGCAAGGCAAACAAGTCTTGGTTTTAGTACCTGAAATCGGCTTAAC
CCCACAAACCATCAGTCGTTTTCAATCACGTTTTCATTGCAATATTGCTTTACTGCACTCAGGCTTAAATGACACTAAAC
GTTTACAAGCATGGCAACATGCGCAAACGGGCAAAGCCTCTATTATTTTAGGCACACGTTCTGCAATTTATACGCCTTTG
CCGCATTTGGGTTTGATTATTTTAGATGAAGAGCATGATCTTTCGTTTAAACAACAAGAAGGCTTTCGCTATCATGCTCG
CGATGTGGCCATGTATCGTGCACATTTAGAAAATTGCCCGATTATCTTAGGTTCTGCCACGCCTAGTATTGACAGTTATT
ATCTTGCTCGCCAAGAAAAGCTGACACGGATTGAGTTAAATCAACGTGCTGGTGCCGCAATCATGCCGAAAATGCATTTG
ATTGATTTAAAAGTGGCAAAAAAACAGCATGGCTTAAGTGATGTTTTAATTGCTGAAATAAAAAAACGTTTAGAGAAAAA
AGAACAAGTTCTGATTTTTTTAAATCGCCGCGGTTATGCTCCTGTGCTTATCTGTGAAAGCTGTGGCTGGCAGGCCAATT
GCCCCAACTGCGATGCTCACTTTACCCTGCATTTAAAGCCTTATCAGCATTTACATTGTCACCATTGTGGCACGATTAAT
CGTATGCCTGATGCTTGCCCTCAATGCAATCAACAACAATTAAAGCCAATTGGCATGGGAACTGCCAAAGTTGAAGAAAC
CTTGAATGAGCTGTTCCCTCACTTCCCCGTCTTGCGCGTAGATCGTGACTCAACCAGTCGGGTTGGTAGTTGGCAAAAGA
TTTATGATCAAATCCAGAAAAGTGAACCGACCATTTTACTTGGTACTCAAATGCTGGCAAAAGGACATCACTTTCCTTAT
GTCACCTTAGTGGCAATTTTGGATATTGATGCAGGTTTGTTGAGTGTGGATTTCCGTGCTACAGAACGTACTGCGCAATT
AATTATTCAAGTTGCAGGTCGTGCGGGTCGTGGTGAAATGAAAGGTGAGGTCTATTTACAAACCCTAAGACCTGATCATC
CGTTATTAAACACCTTGATTCATAATGACTATCGGACCTTTGCCAAACAAACCTTAAAAGATCGCCAAGCCGCGCTACTT
CCACCCTTTCGTTATACAGCTTTGATCCGTTGTGATTCAAAACATCAGGAAGAAAATTTAAAGTTTTTGACTGAAATGAC
GCAGCTCCTTAGACAAACTGCCGAAGAGAATTTAATTGATATTTGGGGACCTATTCCAGCCCCAATGGAGCGTAAAGCAG
GGCGTTACCAAGCCCATGTGGTTTTGCTTTCTCAAGATCGGGCAAAAATGCATTTTTATATTCGTCAATGGTGGCAACAG
CTGTTACATAGCAAACCCTCTACGATGAAAGTCACCATAGATGTTGATCCGCAAGAGTTGAGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.275

100

0.725