Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   MTO68_RS20435 Genome accession   NZ_CP094620
Coordinates   4331788..4332669 (-) Length   293 a.a.
NCBI ID   WP_239044832.1    Uniprot ID   -
Organism   Acinetobacter sp. NyZ410     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4326788..4337669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS20405 (MTO68_20405) - 4327122..4327496 (-) 375 WP_004725812.1 cytochrome b562 -
  MTO68_RS20410 (MTO68_20410) coaBC 4327659..4328924 (-) 1266 WP_244014149.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  MTO68_RS20415 (MTO68_20415) radC 4329039..4329761 (+) 723 WP_244014151.1 DNA repair protein RadC -
  MTO68_RS20420 (MTO68_20420) - 4329799..4330710 (+) 912 WP_004725806.1 bestrophin family protein -
  MTO68_RS20425 (MTO68_20425) - 4330776..4331060 (+) 285 WP_004816937.1 antibiotic biosynthesis monooxygenase -
  MTO68_RS20430 (MTO68_20430) - 4331375..4331773 (+) 399 WP_244014153.1 hypothetical protein -
  MTO68_RS20435 (MTO68_20435) tonB2 4331788..4332669 (-) 882 WP_239044832.1 TonB family protein Machinery gene
  MTO68_RS20440 (MTO68_20440) - 4332902..4333582 (+) 681 WP_239044831.1 hypothetical protein -
  MTO68_RS20445 (MTO68_20445) - 4333735..4334439 (+) 705 WP_209827967.1 DUF3108 domain-containing protein -
  MTO68_RS20450 (MTO68_20450) - 4334543..4335118 (+) 576 WP_004725796.1 xanthine phosphoribosyltransferase -
  MTO68_RS20455 (MTO68_20455) - 4335272..4336132 (+) 861 WP_244014155.1 acyl-CoA thioesterase II -
  MTO68_RS20460 (MTO68_20460) - 4336356..4336718 (+) 363 WP_004725792.1 hypothetical protein -
  MTO68_RS20465 (MTO68_20465) wrbA 4336821..4337414 (-) 594 WP_004725790.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33480.91 Da        Isoelectric Point: 7.4645

>NTDB_id=670239 MTO68_RS20435 WP_239044832.1 4331788..4332669(-) (tonB2) [Acinetobacter sp. NyZ410]
MIKKLFANTQHSEYWWQDALFVGAVSAAVIAHVLFLSVQFGMPQENNTSTKEIAISIRPSEDEVKDADFLAQANQHGSGT
FRKEHRISSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKTAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHSILDEAAKNSVRKGAPFGRFDSKMKDISELRIVRTWRFDPAESEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=670239 MTO68_RS20435 WP_239044832.1 4331788..4332669(-) (tonB2) [Acinetobacter sp. NyZ410]
ATGATAAAAAAATTATTTGCCAATACACAGCATTCTGAGTATTGGTGGCAAGACGCATTATTTGTTGGAGCTGTTTCTGC
AGCTGTCATTGCACATGTACTTTTTTTATCTGTTCAATTTGGAATGCCACAAGAAAATAATACCAGTACAAAAGAAATCG
CAATCAGTATTCGCCCAAGTGAAGATGAAGTTAAAGATGCAGATTTTTTAGCGCAAGCAAATCAGCATGGTTCTGGAACA
TTCCGTAAAGAGCATCGTATTTCAAGTGATATGCCAGCGCAAGCAGAAGACAAGAGTGCGGGTGATCAGCAACTGGAAGC
TTTAGAGCAAATACAGCAAAAACGAGAATTGAAATTCGAAGAAAAAGTATTAATGACGGTTCTTAGCTGGCAAAAGCAGG
CCGAACAAAACGATCGTAAAAAGGCCATGGAAGAGTTGCAGAGCCAGATGCAGGCTAAAACGGCAATGGTGGCGAGTTTA
GAAGCTCAATATTTACAGAAACAACAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGTATTCAAGCCAAACA
AGATGCATCTGCTGGATATTTAGATAAATTTCGTGAAAAAGTTGAGATGTACGGAAACCGATATTACCCAGATCTTGCCA
AACAGCAGCGTCTTTCGGGTGAGGTCCGTTTAATGGTTATTCTCAATAATGAGGGGGGGATTCGTGCTATACGATTGATT
GAAAGCTCAGGTCATTCAATCCTCGATGAAGCTGCCAAAAACTCAGTGCGTAAAGGGGCACCTTTTGGACGTTTTGATTC
AAAAATGAAAGATATTTCTGAACTGCGGATTGTGCGCACTTGGCGTTTTGATCCAGCTGAATCTGAATTTGAAGTGCGCT
AA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

70.99

100

0.71