Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MTO68_RS19215 Genome accession   NZ_CP094620
Coordinates   4075143..4079669 (-) Length   1508 a.a.
NCBI ID   WP_244013984.1    Uniprot ID   -
Organism   Acinetobacter sp. NyZ410     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 4070143..4084669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS19190 (MTO68_19190) - 4071600..4071974 (-) 375 WP_244013980.1 YbaN family protein -
  MTO68_RS19195 (MTO68_19195) - 4072202..4073047 (+) 846 WP_244013982.1 DUF1853 family protein -
  MTO68_RS19200 (MTO68_19200) - 4073163..4073303 (+) 141 WP_004723791.1 entericidin A/B family lipoprotein -
  MTO68_RS19205 (MTO68_19205) dapE 4073460..4074593 (+) 1134 WP_004723792.1 succinyl-diaminopimelate desuccinylase -
  MTO68_RS19210 (MTO68_19210) - 4074670..4075134 (-) 465 WP_004723795.1 hypothetical protein -
  MTO68_RS19215 (MTO68_19215) chpA 4075143..4079669 (-) 4527 WP_244013984.1 Hpt domain-containing protein Regulator
  MTO68_RS19220 (MTO68_19220) - 4079815..4081884 (-) 2070 WP_004817697.1 methyl-accepting chemotaxis protein -
  MTO68_RS19225 (MTO68_19225) - 4081927..4082463 (-) 537 WP_004723799.1 chemotaxis protein CheW -
  MTO68_RS19230 (MTO68_19230) - 4082467..4082835 (-) 369 WP_004723801.1 response regulator -
  MTO68_RS19235 (MTO68_19235) pilG 4082861..4083244 (-) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  MTO68_RS19240 (MTO68_19240) - 4083529..4084170 (+) 642 WP_244013986.1 hypothetical protein -

Sequence


Protein


Download         Length: 1508 a.a.        Molecular weight: 170373.52 Da        Isoelectric Point: 4.4382

>NTDB_id=670235 MTO68_RS19215 WP_244013984.1 4075143..4079669(-) (chpA) [Acinetobacter sp. NyZ410]
MKEILKHLVEHVTLPEDAYLGQDEEILEIFVEELEEIFEQLQTSLDRWQLEEFKDTELVNIRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRIITKNLELTSEIQHYVSAVFNIYKFKLYSEFLNRKPHHLDLAPLVYLGQQLQQKQSLEPALDELLAL
SNTLDNENVITGLEIGEDTATAEVTSVTTPHVVDHVADGSTDTTEEEVAVESTVADDSLTSETLEIFVEESEEHLAAIKD
FLHLEEHTPDQYNRLIRALHTLRGSSSMAHVNEVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLYVLKLK
GNQAVELQTIYQKFNDAWERYDFQHQYQHSQTGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPAYFQQLAQQAQMLIDHTN
NRAAQGIHDFSLALKDGYEQVIRKPDLLNTDYAFEMFSKAHQEFIHLFDTLASGQRVSLNESTQAILAELHDYLHQEIDT
GVAGQIVETRTALDTEQQPDTVSIAANPVESVGNYVLTQINLDKQNIDSEHSQREFDADVLDIFIEEADELLVGMDHDLN
TWSSHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAEPHIIQAIRLIQDDVADRIQLIREK
SIDYPATHILSVLHNIDQQGPIEAVQASTAVEPQFSHDAVDLHELEYVADDIVLAIVETPELLETELLDQDQQPAIDDAQ
LFIDANQDAGLDPVEVVARETFIEEARELIDDGLSILSQWFDQRSNRSFLLQLQRIAHSLKGGAKMVKLEEVADIAYELE
NAFEQFGLHNFNSNVYDGLLEKTFHWLDAAIFKHHYDNFEGLKSSLHSIEYVDVSAQLPEKLSRTNLIFEQSISEFVQGD
GTEPPSMLGEWDLSQKTESNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGEL
ESQIIAKHGDLSARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRL
VPFSRLLPRLQRLVRQTSSTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDAEQRQKSGKALTGRIDLN
ISRQGTDVLVSFKDDGKGIDPKVIRDKAIEKGLIKTDQQLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSL
GGQVSVSSELGYGSTFTITVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDFQSYKLRYL
GEFTSNQVTPRLHGLAHSLPVLLIKGSLGQSIAILVDQLIGSRSQIVVKPIGKQFATINAIAGATILGDGQVCLILDGQN
IARQVQASTRGSAEHLQHDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIE
MPRMDGFEVTNLVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLENIEALLTVK

Nucleotide


Download         Length: 4527 bp        

>NTDB_id=670235 MTO68_RS19215 WP_244013984.1 4075143..4079669(-) (chpA) [Acinetobacter sp. NyZ410]
ATGAAAGAAATATTAAAACATTTAGTGGAACACGTTACTTTACCTGAAGATGCGTATCTTGGTCAGGATGAGGAAATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGCTACAAACCTCTCTTGATCGATGGCAACTCGAAGAGTTTA
AAGATACCGAATTGGTCAATATTCGCCGTTATTTTCATACGCTTAAGGGGTCTGGGCGTATGGTGGGGGCTAAACGTTCT
GGTGAACTTGCTTGGACCGTTGAAGATACATTAAATCGTATTATTACGAAAAATCTGGAACTTACTTCCGAGATTCAACA
CTATGTAAGTGCAGTATTTAATATTTATAAGTTCAAACTCTACTCAGAGTTTTTAAATCGAAAACCGCATCATTTAGATT
TAGCACCTTTGGTGTATTTGGGGCAGCAGCTACAACAGAAACAAAGCTTAGAACCTGCTTTAGACGAGTTATTGGCATTA
TCAAATACACTGGATAATGAAAATGTCATTACTGGTTTGGAGATTGGTGAAGATACTGCAACAGCAGAAGTAACCTCTGT
GACCACTCCGCATGTGGTTGATCACGTTGCAGATGGCTCTACAGATACGACTGAAGAAGAAGTGGCAGTTGAATCGACTG
TTGCAGATGATAGTTTAACCTCTGAAACCTTGGAAATCTTTGTTGAAGAGTCAGAGGAGCATCTGGCGGCAATTAAAGAC
TTTTTGCACTTAGAAGAACATACGCCTGATCAATATAATCGCTTGATTCGTGCCTTGCATACTTTGCGTGGCAGTTCTTC
AATGGCGCACGTCAATGAGGTCTTTGAAGCAAGTGGTAAGGTCGAGCATTTATTTAAAGTATTGGTTCAAGAAGATACCG
AGTCCTCAAAAAATGAAAATGCGCTACTGACTTACTATGCTGAATTTGTCAGTGATTATCTCTATGTTTTAAAGCTGAAA
GGTAATCAAGCTGTTGAGCTACAAACCATTTATCAAAAATTTAATGATGCTTGGGAACGCTACGATTTCCAACACCAATA
TCAACATTCACAAACGGGTTTAGTCACACAATTGGTTGATCTAGAGATCGATCTATTGCTTGATGCCGAGTTTGAGTTTG
ATAAGCGTGCCCAAGTTGAATATCCAGCATATTTCCAACAACTGGCTCAACAAGCGCAGATGTTGATAGATCATACCAAT
AATCGTGCTGCACAAGGCATTCATGATTTTAGTCTTGCTTTAAAAGATGGTTATGAACAAGTTATTCGCAAGCCTGATTT
ATTAAATACTGATTATGCTTTTGAAATGTTTTCTAAGGCCCATCAGGAATTTATTCATTTATTCGATACTTTGGCCTCAG
GACAAAGAGTCAGCCTTAATGAATCAACACAAGCGATTTTGGCTGAGTTACATGACTATTTACACCAAGAAATAGACACT
GGTGTTGCTGGTCAAATTGTTGAAACAAGGACTGCGCTAGATACTGAACAGCAGCCAGATACAGTCTCAATTGCAGCGAA
CCCTGTTGAATCAGTAGGGAACTATGTACTGACGCAAATTAATCTGGATAAACAGAATATTGACTCAGAACATAGTCAAC
GTGAATTTGATGCTGATGTTCTCGACATTTTTATTGAAGAAGCCGACGAATTGTTGGTTGGAATGGACCATGACTTAAAT
ACGTGGTCAAGCCATCCTGATGACACAACCGCATTAAACAATTTGATGCGTTATTTGCATACCTTAAAGGGTGGTGCAAA
TATGGTGCAAGCCACCCATATTGGTTTGATTGCACACGAGTTGGAAACCATTTATGAACGCGTGATTAAAGGTCAACTCA
AAGCAGAACCACACATTATTCAAGCGATTCGTTTAATTCAAGATGATGTGGCAGACCGTATTCAATTGATTCGCGAAAAA
TCAATTGATTATCCAGCTACTCATATTCTCAGTGTTTTACACAATATCGATCAGCAAGGTCCGATTGAAGCTGTTCAAGC
ATCAACTGCGGTTGAGCCACAATTTAGTCATGATGCAGTAGATTTGCATGAACTTGAATATGTTGCAGATGATATCGTTT
TAGCGATTGTTGAAACTCCAGAACTGCTTGAAACTGAACTGTTGGATCAAGATCAACAACCTGCAATTGATGATGCTCAA
TTATTTATAGATGCAAATCAAGATGCAGGTTTAGATCCTGTTGAAGTTGTTGCTCGAGAAACCTTTATTGAAGAAGCACG
AGAGCTGATTGATGATGGTTTGAGCATTTTATCTCAATGGTTTGATCAGCGTAGCAACCGTAGTTTCCTACTCCAATTAC
AACGTATTGCACACAGCTTAAAAGGCGGTGCAAAAATGGTGAAATTGGAAGAAGTGGCTGATATTGCATATGAATTAGAA
AATGCATTTGAGCAATTTGGTTTACATAATTTTAATTCGAATGTTTATGATGGTTTATTGGAAAAAACCTTTCATTGGCT
AGATGCTGCAATCTTTAAACATCACTATGATAATTTTGAAGGCTTAAAATCGAGCTTACATAGTATTGAATATGTTGATG
TATCCGCACAGCTTCCAGAAAAACTATCTCGAACAAACTTAATCTTTGAGCAATCGATCAGTGAGTTTGTTCAGGGGGAT
GGTACAGAGCCACCGTCAATGTTGGGTGAATGGGATCTGTCACAAAAAACTGAATCTAACAATGAGATGATTCGTATCTC
TGCCGATTTGGTTGAAAAAATGATCGACCTTTCTGGTGAAAACGCGATCAACCGTTCACGTATTGAGATGGATTTAGGGC
AGTTAGGGAATACCTTGACTGATATGGAGTTGGCTATTCAACGTTTGGCAGATCAGCTACGCCGTATGGAAGGCGAGTTA
GAAAGCCAAATTATTGCAAAACATGGTGATTTAAGCGCTCGTTATGCTGATTTTGACCCTTTAGAAATGGACCAATATTC
ATCTCTAAACCAGTTATCAAAATCGTTGGCTGAATCGGCATCTGACTTGGTTGATTTTAAAACCACGTTGGCTGAAAAGA
TTCGTGATACTGAAGGTTTATTACTTCAGCAATCTCGTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACTCGTCTG
GTACCATTCTCAAGACTGTTGCCTCGATTACAGCGCTTGGTTCGCCAGACCTCTTCAACCGTGAATAAACCCACTGAGCT
TTTAGTCAATAATACTGAAGGAGAGTTGGATCGTAATATTCTGGAAAAATTAGTTTCACCGTTAGAGCATATGTTGCGGA
ATGCGATTGACCACGGGATTGAAGATGCGGAACAGCGTCAGAAATCGGGCAAAGCGTTGACTGGTCGAATTGATTTGAAT
ATTAGTCGTCAAGGTACGGATGTACTTGTCTCGTTTAAAGATGATGGTAAAGGAATTGATCCAAAAGTTATTCGTGATAA
AGCAATCGAAAAAGGCTTAATCAAAACGGATCAACAGCTAGAGCCTGAGGAAATCCTACAGTTTATTTTCCATCCTGGTT
TTAGTACAGCACAGCAAGTGACACAAATCTCTGGTCGTGGTGTTGGCTTGGATGTTGTGCAAAGTGAAATTAAATCACTT
GGTGGACAAGTGAGTGTCAGTTCTGAGTTGGGGTATGGTTCAACCTTTACGATTACCGTACCTACAACAGTTGCGGTCAG
CGATGCCTTGATGGTGAAAGTCGGTGATCAGCAATTTGCAGTCCCATTATCGCAAATTGATCGTATTGTTCGAATTTCAC
CAGCTGCTTTGGAAGAATATTTTGAAACTCAAAATGACTATTTTGATATCGATTTCCAAAGCTATAAGCTACGTTATTTG
GGTGAGTTTACCTCGAATCAAGTCACTCCACGGTTACATGGGCTTGCACATTCATTACCAGTGTTGTTGATCAAGGGAAG
TTTGGGGCAATCGATTGCCATTCTGGTTGATCAGTTAATTGGTTCGCGTTCACAAATTGTGGTTAAACCGATTGGTAAGC
AGTTTGCTACCATCAATGCAATTGCGGGTGCAACTATTCTGGGTGATGGTCAGGTGTGTTTGATTCTGGATGGGCAAAAT
ATTGCACGACAAGTTCAAGCATCTACCCGTGGTAGTGCTGAACATCTTCAACATGATAAACAACGTCATCGTGATCAACG
CCGTTTGATTATGATCGTGGATGACTCAGTTACCGTTCGTAAGGTCACTTCACGTTTGCTTGAACGCCAAGGTTTCGATG
TGATTACTGCGAAAGATGGTGTGGATGCGATTGAGCAACTTGAAAATGTCAAACCAGACTTGATGTTGCTGGATATTGAA
ATGCCACGAATGGATGGTTTTGAAGTCACCAACTTGGTTCGCCACCACGAAATTCACCGCGATTTGCCAATCATCATGAT
TACGTCAAGAACAGGTGAAAAACATCGTGAACGGGCATTTAGCTTAGGTGTGACAAATTATATGGGTAAACCATTCCAAG
AAGCTGATTTATTGGAAAATATTGAAGCTTTGTTGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

58.931

100

0.599