Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   MTO68_RS01450 Genome accession   NZ_CP094620
Coordinates   314144..315712 (-) Length   522 a.a.
NCBI ID   WP_244014726.1    Uniprot ID   -
Organism   Acinetobacter sp. NyZ410     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 309144..320712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS01435 (MTO68_01435) gpmI 309748..311295 (+) 1548 WP_034613550.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  MTO68_RS01440 (MTO68_01440) - 311326..312504 (+) 1179 WP_244014725.1 S41 family peptidase -
  MTO68_RS01445 (MTO68_01445) pilR 312711..314126 (-) 1416 WP_239046606.1 sigma-54 dependent transcriptional regulator Regulator
  MTO68_RS01450 (MTO68_01450) pilS 314144..315712 (-) 1569 WP_244014726.1 ATP-binding protein Regulator
  MTO68_RS01455 (MTO68_01455) - 315749..316384 (-) 636 WP_004718392.1 response regulator -
  MTO68_RS01460 (MTO68_01460) pbpG 316617..317672 (+) 1056 WP_004718389.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  MTO68_RS01465 (MTO68_01465) - 317844..318473 (+) 630 WP_244014728.1 hypothetical protein -
  MTO68_RS01470 (MTO68_01470) - 318483..319256 (+) 774 WP_244014730.1 hypothetical protein -
  MTO68_RS01475 (MTO68_01475) thrC 319323..320462 (-) 1140 WP_004818568.1 threonine synthase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59581.14 Da        Isoelectric Point: 6.4990

>NTDB_id=670215 MTO68_RS01450 WP_244014726.1 314144..315712(-) (pilS) [Acinetobacter sp. NyZ410]
MSPTVTVPIYQTIYRLGTLYSGYRLVIAFCLVIIFLITLEHQPVHYQYPSLYFYSLTAFTLIAALQMMLLKFYPHGVGRQ
FIGFFIVDIPFLSTLVFALNGPNLAISILFVIAVFTANFLLSKNKALFVTLVSVIAIIYQQFLGSFFDFSNLNNISNSAL
LAFLFFMVYGIGQIAINRFQVLESLNTYQSLELFKLQNINRYILEQIEVGYLVLDEKCKIIVSNPAACLLLGISPLYAHE
QYHLSSFQPDLYEILKDAMLRDGERFQFESHQSSYTVDIRVQKLIVPHQALTLLVLEDAQKINQKVQQLKLAALGQLSAS
IAHEIRNPLAAIAQANDLFISSDPEQQTILNQIITKQTIRINNIIKDTLDMAKNKKTHTSKINFQEFVDDLLRHDLGDAQ
EKIKLEVQSDVWIYFDDSHLRQVLINLVRNALRHNDQNAEHILVQTFKNESHVYIDVIDYGKGVTKQDLSQLFQPFFSTE
INGTGLGLYLSQTICEANQAKLIYVEQKQQGACFRIECPLMD

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=670215 MTO68_RS01450 WP_244014726.1 314144..315712(-) (pilS) [Acinetobacter sp. NyZ410]
ATGTCGCCTACGGTAACGGTTCCCATTTATCAAACAATTTACCGTCTAGGCACACTGTATTCAGGGTATAGATTGGTTAT
TGCCTTTTGCTTAGTCATTATTTTTCTGATTACCCTTGAACATCAACCCGTACATTACCAATATCCCAGCTTATATTTTT
ATTCTCTAACCGCATTTACGCTGATTGCAGCATTACAAATGATGCTGCTCAAGTTCTACCCGCATGGGGTTGGACGACAA
TTTATTGGTTTTTTTATTGTTGATATTCCCTTTCTAAGTACCTTGGTATTTGCCCTCAATGGGCCAAATTTAGCCATCAG
TATTTTGTTCGTGATTGCTGTTTTTACCGCGAATTTTCTGTTGAGTAAAAATAAAGCGCTATTCGTAACACTGGTTTCTG
TGATTGCGATTATTTACCAACAGTTTTTAGGCAGCTTCTTCGATTTTTCAAATTTAAATAATATTAGTAACAGTGCCTTA
TTGGCTTTTTTATTTTTTATGGTCTATGGCATTGGGCAGATTGCAATTAATCGCTTCCAAGTTTTAGAGTCGTTAAATAC
CTATCAATCTCTTGAATTATTTAAGTTACAGAACATTAACCGCTATATTTTAGAACAGATTGAAGTGGGTTATTTGGTGC
TCGATGAAAAGTGCAAAATTATCGTCAGTAACCCTGCTGCCTGTTTACTTTTGGGTATTTCACCACTTTACGCGCATGAG
CAATATCATTTATCCAGCTTTCAACCAGACTTATATGAAATCTTAAAAGATGCCATGTTACGTGATGGAGAACGCTTCCA
ATTTGAATCGCATCAGTCCTCGTATACGGTCGATATTCGCGTACAAAAATTGATTGTTCCGCATCAAGCACTCACGCTTT
TGGTCCTCGAAGATGCACAAAAAATTAATCAAAAGGTACAACAACTCAAACTTGCTGCACTTGGTCAATTGTCCGCCAGT
ATTGCCCATGAGATTCGCAATCCACTTGCTGCCATTGCGCAGGCCAATGATCTCTTTATCAGCAGTGACCCAGAACAACA
AACCATTTTAAATCAAATTATTACCAAACAGACCATCCGTATCAACAATATTATTAAAGATACCTTGGATATGGCAAAAA
ATAAAAAGACCCATACATCGAAAATTAATTTTCAAGAATTTGTTGATGACTTATTACGCCATGATTTAGGGGATGCTCAG
GAAAAAATCAAATTAGAGGTTCAATCTGATGTTTGGATTTATTTTGATGATTCTCATCTTCGACAAGTTTTAATCAATTT
AGTGCGTAATGCATTACGTCATAATGATCAAAATGCTGAGCACATTTTAGTGCAAACGTTTAAAAATGAATCACACGTAT
ATATCGATGTGATTGATTATGGGAAAGGCGTCACAAAACAAGATCTTTCGCAATTATTTCAGCCATTTTTTAGTACCGAA
ATCAATGGAACTGGTTTAGGATTGTACCTATCGCAGACGATATGCGAAGCGAATCAAGCGAAACTAATTTACGTAGAGCA
AAAACAACAAGGGGCGTGCTTCCGTATCGAATGCCCACTCATGGATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

58.594

98.084

0.575